Gene : Phvul.002G259800 P. vulgaris v2.1
Defline:  (1 of 10) PF05212 - Protein of unknown function (DUF707) (DUF707) Genomic Order:  2574
Name:  ? Phvul.002G259800 Secondary Identifier:  ? PAC:37174370
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G259800 0.5kb upstream 0.5kb upstream 8857 true Chr02: 43108621-43117477 Phaseolus vulgaris
Phvul.002G259800 0.5kb upstream 0.5kb upstream 500 false Chr02: 43108621-43109120 Phaseolus vulgaris
Phvul.002G259800 0.5kb downstream 0.5kb downstream 8857 true Chr02: 43109121-43117977 Phaseolus vulgaris
Phvul.002G259800 0.5kb downstream 0.5kb downstream 500 false Chr02: 43117478-43117977 Phaseolus vulgaris
Phvul.002G259800 1.0kb upstream 1.0kb upstream 9357 true Chr02: 43108121-43117477 Phaseolus vulgaris
Phvul.002G259800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 43108121-43109120 Phaseolus vulgaris
Phvul.002G259800 1.0kb downstream 1.0kb downstream 9357 true Chr02: 43109121-43118477 Phaseolus vulgaris
Phvul.002G259800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 43117478-43118477 Phaseolus vulgaris
Phvul.002G259800 2.0kb upstream 2.0kb upstream 10357 true Chr02: 43107121-43117477 Phaseolus vulgaris
Phvul.002G259800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 43107121-43109120 Phaseolus vulgaris
Phvul.002G259800 2.0kb downstream 2.0kb downstream 10357 true Chr02: 43109121-43119477 Phaseolus vulgaris
Phvul.002G259800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 43117478-43119477 Phaseolus vulgaris
Phvul.002G259800 5.0kb upstream 5.0kb upstream 13357 true Chr02: 43104121-43117477 Phaseolus vulgaris
Phvul.002G259800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 43104121-43109120 Phaseolus vulgaris
Phvul.002G259800 5.0kb downstream 5.0kb downstream 13357 true Chr02: 43109121-43122477 Phaseolus vulgaris
Phvul.002G259800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 43117478-43122477 Phaseolus vulgaris
Phvul.002G259800 10.0kb upstream 10.0kb upstream 18357 true Chr02: 43099121-43117477 Phaseolus vulgaris
Phvul.002G259800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 43099121-43109120 Phaseolus vulgaris
Phvul.002G259800 10.0kb downstream 10.0kb downstream 18357 true Chr02: 43109121-43127477 Phaseolus vulgaris
Phvul.002G259800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 43117478-43127477 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314798 5265 Fabidae View MSA
124068224 5270 Rosid View MSA
123742371 5271 Pentapetalae View MSA
122797381 5272 Eudicot View MSA
122046740 5273 Angiosperm View MSA
121347735 5274 Embryophyte View MSA
123426523 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.40579 0.0 12.652   Low
cufflinks 9.91601 0.0 26.5035    
cufflinks 6.52502 0.0 18.0408    
cufflinks 10.5242 0.0 28.1238    
cufflinks 12.1458 0.0 32.1277    
cufflinks 6.96087 0.0 19.1541    
cufflinks 12.6046 0.0 33.1073    
cufflinks 8.18359 0.0 22.098    
cufflinks 11.4843 0.0 30.3926    
cufflinks 5.40583 0.0 15.2262   Low
cufflinks 17.917 0.0 46.4882   High

0 Strain