Gene : Phvul.002G260400 P. vulgaris v2.1
Defline:  (1 of 1) 3.6.3.2 - Magnesium-importing ATPase / Mg(2+)-importing ATPase Genomic Order:  2580
Name:  ? Phvul.002G260400 Secondary Identifier:  ? PAC:37178852
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G260400 0.5kb upstream 0.5kb upstream 6132 true Chr02: 43155156-43161287 Phaseolus vulgaris
Phvul.002G260400 0.5kb upstream 0.5kb upstream 500 false Chr02: 43155156-43155655 Phaseolus vulgaris
Phvul.002G260400 0.5kb downstream 0.5kb downstream 6132 true Chr02: 43155656-43161787 Phaseolus vulgaris
Phvul.002G260400 0.5kb downstream 0.5kb downstream 500 false Chr02: 43161288-43161787 Phaseolus vulgaris
Phvul.002G260400 1.0kb upstream 1.0kb upstream 6632 true Chr02: 43154656-43161287 Phaseolus vulgaris
Phvul.002G260400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 43154656-43155655 Phaseolus vulgaris
Phvul.002G260400 1.0kb downstream 1.0kb downstream 6632 true Chr02: 43155656-43162287 Phaseolus vulgaris
Phvul.002G260400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 43161288-43162287 Phaseolus vulgaris
Phvul.002G260400 2.0kb upstream 2.0kb upstream 7632 true Chr02: 43153656-43161287 Phaseolus vulgaris
Phvul.002G260400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 43153656-43155655 Phaseolus vulgaris
Phvul.002G260400 2.0kb downstream 2.0kb downstream 7632 true Chr02: 43155656-43163287 Phaseolus vulgaris
Phvul.002G260400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 43161288-43163287 Phaseolus vulgaris
Phvul.002G260400 5.0kb upstream 5.0kb upstream 10632 true Chr02: 43150656-43161287 Phaseolus vulgaris
Phvul.002G260400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 43150656-43155655 Phaseolus vulgaris
Phvul.002G260400 5.0kb downstream 5.0kb downstream 10632 true Chr02: 43155656-43166287 Phaseolus vulgaris
Phvul.002G260400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 43161288-43166287 Phaseolus vulgaris
Phvul.002G260400 10.0kb upstream 10.0kb upstream 15632 true Chr02: 43145656-43161287 Phaseolus vulgaris
Phvul.002G260400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 43145656-43155655 Phaseolus vulgaris
Phvul.002G260400 10.0kb downstream 10.0kb downstream 15632 true Chr02: 43155656-43171287 Phaseolus vulgaris
Phvul.002G260400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 43161288-43171287 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300868 5265 Fabidae View MSA
124074792 5270 Rosid View MSA
123753188 5271 Pentapetalae View MSA
122795849 5272 Eudicot View MSA
122049499 5273 Angiosperm View MSA
121351621 5274 Embryophyte View MSA
123428805 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.432443 0.0 1.54892    
cufflinks 0.606991 0.0 2.10067    
cufflinks 0.954719 0.0 3.12111   High
cufflinks 0.490775 0.0 1.74689 Low  
cufflinks 0.4475 0.0 1.60868 Low  
cufflinks 1.18047 0.0 3.78433   High
cufflinks 0.215608 0.0 0.820538 Low Low
cufflinks 0.445587 0.0 1.58427 Low  
cufflinks 0.281428 0.0 1.04959 Low Low
cufflinks 0.328519 0.0 1.2079    
cufflinks 0.41793 0.0 1.5104 Low  

0 Strain