Gene : Phvul.002G262900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12460:SF4 - ENTH/VHS FAMILY PROTEIN Genomic Order:  2605
Name:  ? Phvul.002G262900 Secondary Identifier:  ? PAC:37174675
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G262900 0.5kb upstream 0.5kb upstream 5817 true Chr02: 43466705-43472521 Phaseolus vulgaris
Phvul.002G262900 0.5kb upstream 0.5kb upstream 500 false Chr02: 43466705-43467204 Phaseolus vulgaris
Phvul.002G262900 0.5kb downstream 0.5kb downstream 5817 true Chr02: 43467205-43473021 Phaseolus vulgaris
Phvul.002G262900 0.5kb downstream 0.5kb downstream 500 false Chr02: 43472522-43473021 Phaseolus vulgaris
Phvul.002G262900 1.0kb upstream 1.0kb upstream 6317 true Chr02: 43466205-43472521 Phaseolus vulgaris
Phvul.002G262900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 43466205-43467204 Phaseolus vulgaris
Phvul.002G262900 1.0kb downstream 1.0kb downstream 6317 true Chr02: 43467205-43473521 Phaseolus vulgaris
Phvul.002G262900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 43472522-43473521 Phaseolus vulgaris
Phvul.002G262900 2.0kb upstream 2.0kb upstream 7317 true Chr02: 43465205-43472521 Phaseolus vulgaris
Phvul.002G262900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 43465205-43467204 Phaseolus vulgaris
Phvul.002G262900 2.0kb downstream 2.0kb downstream 7317 true Chr02: 43467205-43474521 Phaseolus vulgaris
Phvul.002G262900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 43472522-43474521 Phaseolus vulgaris
Phvul.002G262900 5.0kb upstream 5.0kb upstream 10317 true Chr02: 43462205-43472521 Phaseolus vulgaris
Phvul.002G262900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 43462205-43467204 Phaseolus vulgaris
Phvul.002G262900 5.0kb downstream 5.0kb downstream 10317 true Chr02: 43467205-43477521 Phaseolus vulgaris
Phvul.002G262900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 43472522-43477521 Phaseolus vulgaris
Phvul.002G262900 10.0kb upstream 10.0kb upstream 15317 true Chr02: 43457205-43472521 Phaseolus vulgaris
Phvul.002G262900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 43457205-43467204 Phaseolus vulgaris
Phvul.002G262900 10.0kb downstream 10.0kb downstream 15317 true Chr02: 43467205-43482521 Phaseolus vulgaris
Phvul.002G262900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 43472522-43482521 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312278 5265 Fabidae View MSA
124070749 5270 Rosid View MSA
123742286 5271 Pentapetalae View MSA
122795416 5272 Eudicot View MSA
122049571 5273 Angiosperm View MSA
123428880 5275 Viridiplantae View MSA
121348039 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.81454 0.0 22.5504   Low
cufflinks 8.70641 0.0 26.652    
cufflinks 9.35102 0.0 32.7602    
cufflinks 5.89189 0.0 22.8198   Low
cufflinks 7.39183 0.0 23.2686    
cufflinks 9.3654 0.0 28.163    
cufflinks 10.2073 0.0 35.1894    
cufflinks 9.39908 0.0 32.4731    
cufflinks 7.5075 0.0 23.5213    
cufflinks 24.3383 0.0 77.2126   High
cufflinks 7.47242 0.0 23.5474    

0 Strain