Gene : Phvul.002G262000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR30231 - DNA POLYMERASE III SUBUNIT EPSILON Genomic Order:  2596
Name:  ? Phvul.002G262000 Secondary Identifier:  ? PAC:37178093
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G262000 0.5kb upstream 0.5kb upstream 2019 true Chr02: 43401621-43403639 Phaseolus vulgaris
Phvul.002G262000 0.5kb upstream 0.5kb upstream 500 false Chr02: 43403140-43403639 Phaseolus vulgaris
Phvul.002G262000 0.5kb downstream 0.5kb downstream 2019 true Chr02: 43401121-43403139 Phaseolus vulgaris
Phvul.002G262000 0.5kb downstream 0.5kb downstream 500 false Chr02: 43401121-43401620 Phaseolus vulgaris
Phvul.002G262000 1.0kb upstream 1.0kb upstream 2519 true Chr02: 43401621-43404139 Phaseolus vulgaris
Phvul.002G262000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 43403140-43404139 Phaseolus vulgaris
Phvul.002G262000 1.0kb downstream 1.0kb downstream 2519 true Chr02: 43400621-43403139 Phaseolus vulgaris
Phvul.002G262000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 43400621-43401620 Phaseolus vulgaris
Phvul.002G262000 2.0kb upstream 2.0kb upstream 3519 true Chr02: 43401621-43405139 Phaseolus vulgaris
Phvul.002G262000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 43403140-43405139 Phaseolus vulgaris
Phvul.002G262000 2.0kb downstream 2.0kb downstream 3519 true Chr02: 43399621-43403139 Phaseolus vulgaris
Phvul.002G262000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 43399621-43401620 Phaseolus vulgaris
Phvul.002G262000 5.0kb upstream 5.0kb upstream 6519 true Chr02: 43401621-43408139 Phaseolus vulgaris
Phvul.002G262000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 43403140-43408139 Phaseolus vulgaris
Phvul.002G262000 5.0kb downstream 5.0kb downstream 6519 true Chr02: 43396621-43403139 Phaseolus vulgaris
Phvul.002G262000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 43396621-43401620 Phaseolus vulgaris
Phvul.002G262000 10.0kb upstream 10.0kb upstream 11519 true Chr02: 43401621-43413139 Phaseolus vulgaris
Phvul.002G262000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 43403140-43413139 Phaseolus vulgaris
Phvul.002G262000 10.0kb downstream 10.0kb downstream 11519 true Chr02: 43391621-43403139 Phaseolus vulgaris
Phvul.002G262000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 43391621-43401620 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029593 5273 Angiosperm View MSA
122306914 5265 Fabidae View MSA
124064323 5270 Rosid View MSA
123746006 5271 Pentapetalae View MSA
122790595 5272 Eudicot View MSA
121298906 5274 Embryophyte View MSA
123336848 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.334821 0.0 1.32142 Low  
cufflinks 0.675016 0.0 2.51987    
cufflinks 1.05432 0.0 3.80779    
cufflinks 1.1393 0.0 4.0777    
cufflinks 0.305765 0.0 1.21473 Low  
cufflinks 1.5142 0.0 5.21859    
cufflinks 0.325417 0.0 1.28096 Low  
cufflinks 3.39323 0.0 10.6957   High
cufflinks 0.0158028 0.0 0.0845274 Low Low
cufflinks 1.04323 0.0 3.75987    

0 Strain