Gene : Phvul.002G248500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13301:SF25 - BZIP TRANSCRIPTION FACTOR-LIKE PROTEIN Genomic Order:  2457
Name:  ? Phvul.002G248500 Secondary Identifier:  ? PAC:37178373
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G248500 0.5kb upstream 0.5kb upstream 5980 true Chr02: 42075736-42081715 Phaseolus vulgaris
Phvul.002G248500 0.5kb upstream 0.5kb upstream 500 false Chr02: 42081216-42081715 Phaseolus vulgaris
Phvul.002G248500 0.5kb downstream 0.5kb downstream 5980 true Chr02: 42075236-42081215 Phaseolus vulgaris
Phvul.002G248500 0.5kb downstream 0.5kb downstream 500 false Chr02: 42075236-42075735 Phaseolus vulgaris
Phvul.002G248500 1.0kb upstream 1.0kb upstream 6480 true Chr02: 42075736-42082215 Phaseolus vulgaris
Phvul.002G248500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42081216-42082215 Phaseolus vulgaris
Phvul.002G248500 1.0kb downstream 1.0kb downstream 6480 true Chr02: 42074736-42081215 Phaseolus vulgaris
Phvul.002G248500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42074736-42075735 Phaseolus vulgaris
Phvul.002G248500 2.0kb upstream 2.0kb upstream 7480 true Chr02: 42075736-42083215 Phaseolus vulgaris
Phvul.002G248500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42081216-42083215 Phaseolus vulgaris
Phvul.002G248500 2.0kb downstream 2.0kb downstream 7480 true Chr02: 42073736-42081215 Phaseolus vulgaris
Phvul.002G248500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42073736-42075735 Phaseolus vulgaris
Phvul.002G248500 5.0kb upstream 5.0kb upstream 10480 true Chr02: 42075736-42086215 Phaseolus vulgaris
Phvul.002G248500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42081216-42086215 Phaseolus vulgaris
Phvul.002G248500 5.0kb downstream 5.0kb downstream 10480 true Chr02: 42070736-42081215 Phaseolus vulgaris
Phvul.002G248500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42070736-42075735 Phaseolus vulgaris
Phvul.002G248500 10.0kb upstream 10.0kb upstream 15480 true Chr02: 42075736-42091215 Phaseolus vulgaris
Phvul.002G248500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42081216-42091215 Phaseolus vulgaris
Phvul.002G248500 10.0kb downstream 10.0kb downstream 15480 true Chr02: 42065736-42081215 Phaseolus vulgaris
Phvul.002G248500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42065736-42075735 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303171 5265 Fabidae View MSA
124067455 5270 Rosid View MSA
123741785 5271 Pentapetalae View MSA
122796865 5272 Eudicot View MSA
122048673 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121350837 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.169 0.0 27.4811    
cufflinks 10.537 0.0 28.3716    
cufflinks 21.0179 0.0 54.4454   High
cufflinks 9.72577 0.0 26.3816    
cufflinks 9.25725 0.0 25.2861    
cufflinks 15.7483 0.0 41.2657   High
cufflinks 11.1991 0.0 29.9585    
cufflinks 9.22777 0.0 24.9708    
cufflinks 13.1675 0.0 34.8595    
cufflinks 7.40875 0.0 20.5796   Low
cufflinks 10.9541 0.0 29.4881    

0 Strain