Gene : Phvul.002G249700 P. vulgaris v2.1
Defline:  (1 of 1) K11548 - kinetochore protein Nuf2 (NUF2, CDCA1) Genomic Order:  2470
Name:  ? Phvul.002G249700 Secondary Identifier:  ? PAC:37175313
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G249700 0.5kb upstream 0.5kb upstream 5166 true Chr02: 42195114-42200279 Phaseolus vulgaris
Phvul.002G249700 0.5kb upstream 0.5kb upstream 500 false Chr02: 42199780-42200279 Phaseolus vulgaris
Phvul.002G249700 0.5kb downstream 0.5kb downstream 5166 true Chr02: 42194614-42199779 Phaseolus vulgaris
Phvul.002G249700 0.5kb downstream 0.5kb downstream 500 false Chr02: 42194614-42195113 Phaseolus vulgaris
Phvul.002G249700 1.0kb upstream 1.0kb upstream 5666 true Chr02: 42195114-42200779 Phaseolus vulgaris
Phvul.002G249700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42199780-42200779 Phaseolus vulgaris
Phvul.002G249700 1.0kb downstream 1.0kb downstream 5666 true Chr02: 42194114-42199779 Phaseolus vulgaris
Phvul.002G249700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42194114-42195113 Phaseolus vulgaris
Phvul.002G249700 2.0kb upstream 2.0kb upstream 6666 true Chr02: 42195114-42201779 Phaseolus vulgaris
Phvul.002G249700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42199780-42201779 Phaseolus vulgaris
Phvul.002G249700 2.0kb downstream 2.0kb downstream 6666 true Chr02: 42193114-42199779 Phaseolus vulgaris
Phvul.002G249700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42193114-42195113 Phaseolus vulgaris
Phvul.002G249700 5.0kb upstream 5.0kb upstream 9666 true Chr02: 42195114-42204779 Phaseolus vulgaris
Phvul.002G249700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42199780-42204779 Phaseolus vulgaris
Phvul.002G249700 5.0kb downstream 5.0kb downstream 9666 true Chr02: 42190114-42199779 Phaseolus vulgaris
Phvul.002G249700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42190114-42195113 Phaseolus vulgaris
Phvul.002G249700 10.0kb upstream 10.0kb upstream 14666 true Chr02: 42195114-42209779 Phaseolus vulgaris
Phvul.002G249700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42199780-42209779 Phaseolus vulgaris
Phvul.002G249700 10.0kb downstream 10.0kb downstream 14666 true Chr02: 42185114-42199779 Phaseolus vulgaris
Phvul.002G249700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42185114-42195113 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302214 5265 Fabidae View MSA
124070020 5270 Rosid View MSA
123741477 5271 Pentapetalae View MSA
122794633 5272 Eudicot View MSA
122050952 5273 Angiosperm View MSA
121351685 5274 Embryophyte View MSA
123425820 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.20374 0.0 12.0027    
cufflinks 11.8284 0.0 31.0597   High
cufflinks 7.88075 0.0 21.3302    
cufflinks 3.46665 0.0 10.1756   Low
cufflinks 9.48523 0.0 25.3922    
cufflinks 6.68064 0.0 18.3001    
cufflinks 7.63118 0.0 20.5937    
cufflinks 7.05698 0.0 19.1721    
cufflinks 9.40314 0.0 24.9809    
cufflinks 2.04075 0.0 6.3392   Low
cufflinks 7.98984 0.0 21.6014    

0 Strain