Gene : Phvul.002G249600 P. vulgaris v2.1
Defline:  (1 of 3) 2.1.2.10 - Aminomethyltransferase / Tetrahydrofolate aminomethyltransferase Genomic Order:  2469
Name:  ? Phvul.002G249600 Secondary Identifier:  ? PAC:37176129
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris GLYCLEAV-PWY Phaseolus vulgaris pathologic  

Genomics

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Gene Structure Displayer

Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G249600 0.5kb upstream 0.5kb upstream 11511 true Chr02: 42177974-42189484 Phaseolus vulgaris
Phvul.002G249600 0.5kb upstream 0.5kb upstream 500 false Chr02: 42188985-42189484 Phaseolus vulgaris
Phvul.002G249600 0.5kb downstream 0.5kb downstream 11511 true Chr02: 42177474-42188984 Phaseolus vulgaris
Phvul.002G249600 0.5kb downstream 0.5kb downstream 500 false Chr02: 42177474-42177973 Phaseolus vulgaris
Phvul.002G249600 1.0kb upstream 1.0kb upstream 12011 true Chr02: 42177974-42189984 Phaseolus vulgaris
Phvul.002G249600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42188985-42189984 Phaseolus vulgaris
Phvul.002G249600 1.0kb downstream 1.0kb downstream 12011 true Chr02: 42176974-42188984 Phaseolus vulgaris
Phvul.002G249600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42176974-42177973 Phaseolus vulgaris
Phvul.002G249600 2.0kb upstream 2.0kb upstream 13011 true Chr02: 42177974-42190984 Phaseolus vulgaris
Phvul.002G249600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42188985-42190984 Phaseolus vulgaris
Phvul.002G249600 2.0kb downstream 2.0kb downstream 13011 true Chr02: 42175974-42188984 Phaseolus vulgaris
Phvul.002G249600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42175974-42177973 Phaseolus vulgaris
Phvul.002G249600 5.0kb upstream 5.0kb upstream 16011 true Chr02: 42177974-42193984 Phaseolus vulgaris
Phvul.002G249600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42188985-42193984 Phaseolus vulgaris
Phvul.002G249600 5.0kb downstream 5.0kb downstream 16011 true Chr02: 42172974-42188984 Phaseolus vulgaris
Phvul.002G249600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42172974-42177973 Phaseolus vulgaris
Phvul.002G249600 10.0kb upstream 10.0kb upstream 21011 true Chr02: 42177974-42198984 Phaseolus vulgaris
Phvul.002G249600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42188985-42198984 Phaseolus vulgaris
Phvul.002G249600 10.0kb downstream 10.0kb downstream 21011 true Chr02: 42167974-42188984 Phaseolus vulgaris
Phvul.002G249600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42167974-42177973 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307093 5265 Fabidae View MSA
124066911 5270 Rosid View MSA
123736787 5271 Pentapetalae View MSA
122786852 5272 Eudicot View MSA
122044348 5273 Angiosperm View MSA
121345133 5274 Embryophyte View MSA
123423881 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.69157 0.0 18.7586    
cufflinks 8.68146 0.0 23.8587    
cufflinks 32.9576 0.0 85.3007   High
cufflinks 7.9372 0.0 22.0913    
cufflinks 9.19162 0.0 25.2481    
cufflinks 20.5831 0.0 53.4308   High
cufflinks 7.10135 0.0 19.8371    
cufflinks 10.6259 0.0 28.5914    
cufflinks 6.38971 0.0 18.0592    
cufflinks 11.1854 0.0 30.1411    
cufflinks 7.521 0.0 21.0242    

0 Strain