Gene : Phvul.002G249900 P. vulgaris v2.1
Defline:  (1 of 2) 1.1.1.60 - 2-hydroxy-3-oxopropionate reductase / Tartronate semialdehyde reductase Genomic Order:  2474
Name:  ? Phvul.002G249900 Secondary Identifier:  ? PAC:37176468
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G249900 0.5kb upstream 0.5kb upstream 1427 true Chr02: 42236968-42238394 Phaseolus vulgaris
Phvul.002G249900 0.5kb upstream 0.5kb upstream 500 false Chr02: 42237895-42238394 Phaseolus vulgaris
Phvul.002G249900 0.5kb downstream 0.5kb downstream 1427 true Chr02: 42236468-42237894 Phaseolus vulgaris
Phvul.002G249900 0.5kb downstream 0.5kb downstream 500 false Chr02: 42236468-42236967 Phaseolus vulgaris
Phvul.002G249900 1.0kb upstream 1.0kb upstream 1927 true Chr02: 42236968-42238894 Phaseolus vulgaris
Phvul.002G249900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42237895-42238894 Phaseolus vulgaris
Phvul.002G249900 1.0kb downstream 1.0kb downstream 1927 true Chr02: 42235968-42237894 Phaseolus vulgaris
Phvul.002G249900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42235968-42236967 Phaseolus vulgaris
Phvul.002G249900 2.0kb upstream 2.0kb upstream 2927 true Chr02: 42236968-42239894 Phaseolus vulgaris
Phvul.002G249900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42237895-42239894 Phaseolus vulgaris
Phvul.002G249900 2.0kb downstream 2.0kb downstream 2927 true Chr02: 42234968-42237894 Phaseolus vulgaris
Phvul.002G249900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42234968-42236967 Phaseolus vulgaris
Phvul.002G249900 5.0kb upstream 5.0kb upstream 5927 true Chr02: 42236968-42242894 Phaseolus vulgaris
Phvul.002G249900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42237895-42242894 Phaseolus vulgaris
Phvul.002G249900 5.0kb downstream 5.0kb downstream 5927 true Chr02: 42231968-42237894 Phaseolus vulgaris
Phvul.002G249900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42231968-42236967 Phaseolus vulgaris
Phvul.002G249900 10.0kb upstream 10.0kb upstream 10927 true Chr02: 42236968-42247894 Phaseolus vulgaris
Phvul.002G249900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42237895-42247894 Phaseolus vulgaris
Phvul.002G249900 10.0kb downstream 10.0kb downstream 10927 true Chr02: 42226968-42237894 Phaseolus vulgaris
Phvul.002G249900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42226968-42236967 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299863 5265 Fabidae View MSA
124068706 5270 Rosid View MSA
123738256 5271 Pentapetalae View MSA
122793894 5272 Eudicot View MSA
122043282 5273 Angiosperm View MSA
121346771 5274 Embryophyte View MSA
123380441 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.8399 0.0 140.078 High  
cufflinks 76.5503 0.0 201.337 High  
cufflinks 18.4043 0.0 49.4544   Low
cufflinks 130.521 0.0 365.546 High High
cufflinks 69.9953 0.0 185.476 High  
cufflinks 26.429 0.0 69.0179   Low
cufflinks 42.6838 0.0 110.456 High  
cufflinks 55.724 0.0 144.565 High  
cufflinks 44.9262 0.0 116.289 High  
cufflinks 214.346 0.0 628.5 High High
cufflinks 77.7419 0.0 206.789 High  

0 Strain