Gene : Phvul.002G253400 P. vulgaris v2.1
Defline:  (1 of 3) K10251 - 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase (HSD17B12, KAR, IFA38) Genomic Order:  2510
Name:  ? Phvul.002G253400 Secondary Identifier:  ? PAC:37176313
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5080 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6433 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6598 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7036 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7601 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7606 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7619 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G253400 0.5kb upstream 0.5kb upstream 3122 true Chr02: 42547593-42550714 Phaseolus vulgaris
Phvul.002G253400 0.5kb upstream 0.5kb upstream 500 false Chr02: 42547593-42548092 Phaseolus vulgaris
Phvul.002G253400 0.5kb downstream 0.5kb downstream 3122 true Chr02: 42548093-42551214 Phaseolus vulgaris
Phvul.002G253400 0.5kb downstream 0.5kb downstream 500 false Chr02: 42550715-42551214 Phaseolus vulgaris
Phvul.002G253400 1.0kb upstream 1.0kb upstream 3622 true Chr02: 42547093-42550714 Phaseolus vulgaris
Phvul.002G253400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42547093-42548092 Phaseolus vulgaris
Phvul.002G253400 1.0kb downstream 1.0kb downstream 3622 true Chr02: 42548093-42551714 Phaseolus vulgaris
Phvul.002G253400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42550715-42551714 Phaseolus vulgaris
Phvul.002G253400 2.0kb upstream 2.0kb upstream 4622 true Chr02: 42546093-42550714 Phaseolus vulgaris
Phvul.002G253400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42546093-42548092 Phaseolus vulgaris
Phvul.002G253400 2.0kb downstream 2.0kb downstream 4622 true Chr02: 42548093-42552714 Phaseolus vulgaris
Phvul.002G253400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42550715-42552714 Phaseolus vulgaris
Phvul.002G253400 5.0kb upstream 5.0kb upstream 7622 true Chr02: 42543093-42550714 Phaseolus vulgaris
Phvul.002G253400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42543093-42548092 Phaseolus vulgaris
Phvul.002G253400 5.0kb downstream 5.0kb downstream 7622 true Chr02: 42548093-42555714 Phaseolus vulgaris
Phvul.002G253400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42550715-42555714 Phaseolus vulgaris
Phvul.002G253400 10.0kb upstream 10.0kb upstream 12622 true Chr02: 42538093-42550714 Phaseolus vulgaris
Phvul.002G253400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42538093-42548092 Phaseolus vulgaris
Phvul.002G253400 10.0kb downstream 10.0kb downstream 12622 true Chr02: 42548093-42560714 Phaseolus vulgaris
Phvul.002G253400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42550715-42560714 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307257 5265 Fabidae View MSA
124050409 5270 Rosid View MSA
123741518 5271 Pentapetalae View MSA
122787012 5272 Eudicot View MSA
122050087 5273 Angiosperm View MSA
123428985 5275 Viridiplantae View MSA
121351563 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.13542 0.0 3.94128    
cufflinks 0.293502 0.0 1.14457 Low  
cufflinks 0.209228 0.0 0.842334 Low  
cufflinks 24.6669 0.0 63.9334   High
cufflinks 0.46411 0.0 1.75133 Low  
cufflinks 2.25361 0.0 7.22458    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0782401 0.0 0.339792 Low  
cufflinks 0.0236908 0.0 0.116938 Low Low
cufflinks 1.36692 0.0 4.62721    

0 Strain