Gene : Phvul.002G252100 P. vulgaris v2.1
Defline:  (1 of 4) K03294 - basic amino acid/polyamine antiporter, APA family (TC.APA) Genomic Order:  2497
Name:  ? Phvul.002G252100 Secondary Identifier:  ? PAC:37174405
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G252100 0.5kb upstream 0.5kb upstream 4319 true Chr02: 42434029-42438347 Phaseolus vulgaris
Phvul.002G252100 0.5kb upstream 0.5kb upstream 500 false Chr02: 42437848-42438347 Phaseolus vulgaris
Phvul.002G252100 0.5kb downstream 0.5kb downstream 4319 true Chr02: 42433529-42437847 Phaseolus vulgaris
Phvul.002G252100 0.5kb downstream 0.5kb downstream 500 false Chr02: 42433529-42434028 Phaseolus vulgaris
Phvul.002G252100 1.0kb upstream 1.0kb upstream 4819 true Chr02: 42434029-42438847 Phaseolus vulgaris
Phvul.002G252100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42437848-42438847 Phaseolus vulgaris
Phvul.002G252100 1.0kb downstream 1.0kb downstream 4819 true Chr02: 42433029-42437847 Phaseolus vulgaris
Phvul.002G252100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42433029-42434028 Phaseolus vulgaris
Phvul.002G252100 2.0kb upstream 2.0kb upstream 5819 true Chr02: 42434029-42439847 Phaseolus vulgaris
Phvul.002G252100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42437848-42439847 Phaseolus vulgaris
Phvul.002G252100 2.0kb downstream 2.0kb downstream 5819 true Chr02: 42432029-42437847 Phaseolus vulgaris
Phvul.002G252100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42432029-42434028 Phaseolus vulgaris
Phvul.002G252100 5.0kb upstream 5.0kb upstream 8819 true Chr02: 42434029-42442847 Phaseolus vulgaris
Phvul.002G252100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42437848-42442847 Phaseolus vulgaris
Phvul.002G252100 5.0kb downstream 5.0kb downstream 8819 true Chr02: 42429029-42437847 Phaseolus vulgaris
Phvul.002G252100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42429029-42434028 Phaseolus vulgaris
Phvul.002G252100 10.0kb upstream 10.0kb upstream 13819 true Chr02: 42434029-42447847 Phaseolus vulgaris
Phvul.002G252100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42437848-42447847 Phaseolus vulgaris
Phvul.002G252100 10.0kb downstream 10.0kb downstream 13819 true Chr02: 42424029-42437847 Phaseolus vulgaris
Phvul.002G252100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42424029-42434028 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300353 5265 Fabidae View MSA
124062541 5270 Rosid View MSA
123753183 5271 Pentapetalae View MSA
122795315 5272 Eudicot View MSA
122045421 5273 Angiosperm View MSA
121350184 5274 Embryophyte View MSA
123428616 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.61375 0.0 10.4986    
cufflinks 0.968968 0.0 3.26815    
cufflinks 0.0274579 0.0 0.128248 Low Low
cufflinks 2.13121 0.0 6.56584    
cufflinks 0.519207 0.0 1.86646 Low  
cufflinks 0.622014 0.0 2.2061    
cufflinks 3.32374 0.0 9.70806    
cufflinks 3.54413 0.0 10.3334    
cufflinks 7.18165 0.0 19.5166   High
cufflinks 0.286339 0.0 1.08324 Low  
cufflinks 0.847633 0.0 2.89102    

0 Strain