Gene : Phvul.002G252500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24351:SF60 - PROTEIN KINASE PINOID Genomic Order:  2501
Name:  ? Phvul.002G252500 Secondary Identifier:  ? PAC:37175982
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G252500 0.5kb upstream 0.5kb upstream 2852 true Chr02: 42475134-42477985 Phaseolus vulgaris
Phvul.002G252500 0.5kb upstream 0.5kb upstream 500 false Chr02: 42475134-42475633 Phaseolus vulgaris
Phvul.002G252500 0.5kb downstream 0.5kb downstream 2852 true Chr02: 42475634-42478485 Phaseolus vulgaris
Phvul.002G252500 0.5kb downstream 0.5kb downstream 500 false Chr02: 42477986-42478485 Phaseolus vulgaris
Phvul.002G252500 1.0kb upstream 1.0kb upstream 3352 true Chr02: 42474634-42477985 Phaseolus vulgaris
Phvul.002G252500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42474634-42475633 Phaseolus vulgaris
Phvul.002G252500 1.0kb downstream 1.0kb downstream 3352 true Chr02: 42475634-42478985 Phaseolus vulgaris
Phvul.002G252500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42477986-42478985 Phaseolus vulgaris
Phvul.002G252500 2.0kb upstream 2.0kb upstream 4352 true Chr02: 42473634-42477985 Phaseolus vulgaris
Phvul.002G252500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42473634-42475633 Phaseolus vulgaris
Phvul.002G252500 2.0kb downstream 2.0kb downstream 4352 true Chr02: 42475634-42479985 Phaseolus vulgaris
Phvul.002G252500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42477986-42479985 Phaseolus vulgaris
Phvul.002G252500 5.0kb upstream 5.0kb upstream 7352 true Chr02: 42470634-42477985 Phaseolus vulgaris
Phvul.002G252500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42470634-42475633 Phaseolus vulgaris
Phvul.002G252500 5.0kb downstream 5.0kb downstream 7352 true Chr02: 42475634-42482985 Phaseolus vulgaris
Phvul.002G252500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42477986-42482985 Phaseolus vulgaris
Phvul.002G252500 10.0kb upstream 10.0kb upstream 12352 true Chr02: 42465634-42477985 Phaseolus vulgaris
Phvul.002G252500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42465634-42475633 Phaseolus vulgaris
Phvul.002G252500 10.0kb downstream 10.0kb downstream 12352 true Chr02: 42475634-42487985 Phaseolus vulgaris
Phvul.002G252500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42477986-42487985 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311643 5265 Fabidae View MSA
124067652 5270 Rosid View MSA
123738624 5271 Pentapetalae View MSA
122769929 5272 Eudicot View MSA
122046233 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121310576 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.02988 0.0 16.6206    
cufflinks 10.3939 0.0 27.4866   High
cufflinks 0.343923 0.0 1.28388 Low Low
cufflinks 0.994036 0.0 3.28892    
cufflinks 5.65472 0.0 15.5707    
cufflinks 2.49172 0.0 7.53887    
cufflinks 0.697348 0.0 2.41483    
cufflinks 0.335413 0.0 1.25319 Low Low
cufflinks 0.548764 0.0 1.95328    
cufflinks 11.6583 0.0 30.5868   High
cufflinks 8.49356 0.0 22.6653    

0 Strain