Gene : Phvul.002G256100 P. vulgaris v2.1
Defline:  (1 of 4) K02892 - large subunit ribosomal protein L23 (RP-L23, MRPL23, rplW) Genomic Order:  2536
Name:  ? Phvul.002G256100 Secondary Identifier:  ? PAC:37177067
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G256100 0.5kb upstream 0.5kb upstream 1238 true Chr02: 42837112-42838349 Phaseolus vulgaris
Phvul.002G256100 0.5kb upstream 0.5kb upstream 500 false Chr02: 42837112-42837611 Phaseolus vulgaris
Phvul.002G256100 0.5kb downstream 0.5kb downstream 1238 true Chr02: 42837612-42838849 Phaseolus vulgaris
Phvul.002G256100 0.5kb downstream 0.5kb downstream 500 false Chr02: 42838350-42838849 Phaseolus vulgaris
Phvul.002G256100 1.0kb upstream 1.0kb upstream 1738 true Chr02: 42836612-42838349 Phaseolus vulgaris
Phvul.002G256100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42836612-42837611 Phaseolus vulgaris
Phvul.002G256100 1.0kb downstream 1.0kb downstream 1738 true Chr02: 42837612-42839349 Phaseolus vulgaris
Phvul.002G256100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42838350-42839349 Phaseolus vulgaris
Phvul.002G256100 2.0kb upstream 2.0kb upstream 2738 true Chr02: 42835612-42838349 Phaseolus vulgaris
Phvul.002G256100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42835612-42837611 Phaseolus vulgaris
Phvul.002G256100 2.0kb downstream 2.0kb downstream 2738 true Chr02: 42837612-42840349 Phaseolus vulgaris
Phvul.002G256100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42838350-42840349 Phaseolus vulgaris
Phvul.002G256100 5.0kb upstream 5.0kb upstream 5738 true Chr02: 42832612-42838349 Phaseolus vulgaris
Phvul.002G256100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42832612-42837611 Phaseolus vulgaris
Phvul.002G256100 5.0kb downstream 5.0kb downstream 5738 true Chr02: 42837612-42843349 Phaseolus vulgaris
Phvul.002G256100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42838350-42843349 Phaseolus vulgaris
Phvul.002G256100 10.0kb upstream 10.0kb upstream 10738 true Chr02: 42827612-42838349 Phaseolus vulgaris
Phvul.002G256100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42827612-42837611 Phaseolus vulgaris
Phvul.002G256100 10.0kb downstream 10.0kb downstream 10738 true Chr02: 42837612-42848349 Phaseolus vulgaris
Phvul.002G256100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42838350-42848349 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121691029 5273 Angiosperm View MSA
122313500 5265 Fabidae View MSA
124037876 5270 Rosid View MSA
123646715 5271 Pentapetalae View MSA
122680771 5272 Eudicot View MSA
121349805 5274 Embryophyte View MSA
123426659 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.06573 0.0 13.9353    
cufflinks 3.90023 0.0 13.4443    
cufflinks 2.5043 0.0 9.00073   Low
cufflinks 5.64867 0.0 18.5385    
cufflinks 5.68682 0.0 18.8877    
cufflinks 2.56518 0.0 9.2196   Low
cufflinks 3.64963 0.0 12.6382    
cufflinks 5.45771 0.0 18.0062    
cufflinks 6.32473 0.0 20.5561   High
cufflinks 2.55985 0.0 9.22557   Low
cufflinks 4.40264 0.0 15.0161    

0 Strain