Gene : Phvul.002G256800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR15139 - TUBULIN FOLDING COFACTOR C Genomic Order:  2543
Name:  ? Phvul.002G256800 Secondary Identifier:  ? PAC:37177723
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G256800 0.5kb upstream 0.5kb upstream 2015 true Chr02: 42880247-42882261 Phaseolus vulgaris
Phvul.002G256800 0.5kb upstream 0.5kb upstream 500 false Chr02: 42880247-42880746 Phaseolus vulgaris
Phvul.002G256800 0.5kb downstream 0.5kb downstream 2015 true Chr02: 42880747-42882761 Phaseolus vulgaris
Phvul.002G256800 0.5kb downstream 0.5kb downstream 500 false Chr02: 42882262-42882761 Phaseolus vulgaris
Phvul.002G256800 1.0kb upstream 1.0kb upstream 2515 true Chr02: 42879747-42882261 Phaseolus vulgaris
Phvul.002G256800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42879747-42880746 Phaseolus vulgaris
Phvul.002G256800 1.0kb downstream 1.0kb downstream 2515 true Chr02: 42880747-42883261 Phaseolus vulgaris
Phvul.002G256800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42882262-42883261 Phaseolus vulgaris
Phvul.002G256800 2.0kb upstream 2.0kb upstream 3515 true Chr02: 42878747-42882261 Phaseolus vulgaris
Phvul.002G256800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42878747-42880746 Phaseolus vulgaris
Phvul.002G256800 2.0kb downstream 2.0kb downstream 3515 true Chr02: 42880747-42884261 Phaseolus vulgaris
Phvul.002G256800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42882262-42884261 Phaseolus vulgaris
Phvul.002G256800 5.0kb upstream 5.0kb upstream 6515 true Chr02: 42875747-42882261 Phaseolus vulgaris
Phvul.002G256800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42875747-42880746 Phaseolus vulgaris
Phvul.002G256800 5.0kb downstream 5.0kb downstream 6515 true Chr02: 42880747-42887261 Phaseolus vulgaris
Phvul.002G256800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42882262-42887261 Phaseolus vulgaris
Phvul.002G256800 10.0kb upstream 10.0kb upstream 11515 true Chr02: 42870747-42882261 Phaseolus vulgaris
Phvul.002G256800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42870747-42880746 Phaseolus vulgaris
Phvul.002G256800 10.0kb downstream 10.0kb downstream 11515 true Chr02: 42880747-42892261 Phaseolus vulgaris
Phvul.002G256800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42882262-42892261 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306322 5265 Fabidae View MSA
124069115 5270 Rosid View MSA
123737356 5271 Pentapetalae View MSA
122788060 5272 Eudicot View MSA
122045521 5273 Angiosperm View MSA
121344345 5274 Embryophyte View MSA
123426531 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.6338 0.0 31.3227    
cufflinks 12.8665 0.0 34.4656    
cufflinks 6.79773 0.0 19.3338   Low
cufflinks 13.6955 0.0 36.4528   High
cufflinks 12.9966 0.0 34.74    
cufflinks 8.36929 0.0 23.2667    
cufflinks 7.22322 0.0 20.2123   Low
cufflinks 6.64303 0.0 18.7692   Low
cufflinks 11.6381 0.0 31.3541    
cufflinks 9.37935 0.0 25.7452    
cufflinks 14.24 0.0 37.7854   High

0 Strain