Gene : Phvul.002G256700 P. vulgaris v2.1
Defline:  (1 of 1) K02904 - large subunit ribosomal protein L29 (RP-L29, rpmC) Genomic Order:  2542
Name:  ? Phvul.002G256700 Secondary Identifier:  ? PAC:37178504
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G256700 0.5kb upstream 0.5kb upstream 3307 true Chr02: 42876413-42879719 Phaseolus vulgaris
Phvul.002G256700 0.5kb upstream 0.5kb upstream 500 false Chr02: 42876413-42876912 Phaseolus vulgaris
Phvul.002G256700 0.5kb downstream 0.5kb downstream 3307 true Chr02: 42876913-42880219 Phaseolus vulgaris
Phvul.002G256700 0.5kb downstream 0.5kb downstream 500 false Chr02: 42879720-42880219 Phaseolus vulgaris
Phvul.002G256700 1.0kb upstream 1.0kb upstream 3807 true Chr02: 42875913-42879719 Phaseolus vulgaris
Phvul.002G256700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42875913-42876912 Phaseolus vulgaris
Phvul.002G256700 1.0kb downstream 1.0kb downstream 3807 true Chr02: 42876913-42880719 Phaseolus vulgaris
Phvul.002G256700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42879720-42880719 Phaseolus vulgaris
Phvul.002G256700 2.0kb upstream 2.0kb upstream 4807 true Chr02: 42874913-42879719 Phaseolus vulgaris
Phvul.002G256700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42874913-42876912 Phaseolus vulgaris
Phvul.002G256700 2.0kb downstream 2.0kb downstream 4807 true Chr02: 42876913-42881719 Phaseolus vulgaris
Phvul.002G256700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42879720-42881719 Phaseolus vulgaris
Phvul.002G256700 5.0kb upstream 5.0kb upstream 7807 true Chr02: 42871913-42879719 Phaseolus vulgaris
Phvul.002G256700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42871913-42876912 Phaseolus vulgaris
Phvul.002G256700 5.0kb downstream 5.0kb downstream 7807 true Chr02: 42876913-42884719 Phaseolus vulgaris
Phvul.002G256700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42879720-42884719 Phaseolus vulgaris
Phvul.002G256700 10.0kb upstream 10.0kb upstream 12807 true Chr02: 42866913-42879719 Phaseolus vulgaris
Phvul.002G256700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42866913-42876912 Phaseolus vulgaris
Phvul.002G256700 10.0kb downstream 10.0kb downstream 12807 true Chr02: 42876913-42889719 Phaseolus vulgaris
Phvul.002G256700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42879720-42889719 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306285 5265 Fabidae View MSA
124061844 5270 Rosid View MSA
123736935 5271 Pentapetalae View MSA
122791813 5272 Eudicot View MSA
122048296 5273 Angiosperm View MSA
121344034 5274 Embryophyte View MSA
123424171 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 56.1154 0.0 145.077 High  
cufflinks 64.515 0.0 166.819 High  
cufflinks 254.278 0.0 721.637 High High
cufflinks 58.8993 0.0 152.245 High  
cufflinks 40.8423 0.0 106.549 High  
cufflinks 146.755 0.0 394.45 High High
cufflinks 6.73169 0.0 20.3161   Low
cufflinks 10.4385 0.0 30.0647   Low
cufflinks 7.1281 0.0 21.4073   Low
cufflinks 30.9522 0.0 81.8682    
cufflinks 26.6136 0.0 70.8352    

0 Strain