Gene : Phvul.002G254700 P. vulgaris v2.1
Defline:  (1 of 39) PF05678 - VQ motif (VQ) Genomic Order:  2523
Name:  ? Phvul.002G254700 Secondary Identifier:  ? PAC:37178178
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G254700 0.5kb upstream 0.5kb upstream 3106 true Chr02: 42703652-42706757 Phaseolus vulgaris
Phvul.002G254700 0.5kb upstream 0.5kb upstream 500 false Chr02: 42706258-42706757 Phaseolus vulgaris
Phvul.002G254700 0.5kb downstream 0.5kb downstream 3106 true Chr02: 42703152-42706257 Phaseolus vulgaris
Phvul.002G254700 0.5kb downstream 0.5kb downstream 500 false Chr02: 42703152-42703651 Phaseolus vulgaris
Phvul.002G254700 1.0kb upstream 1.0kb upstream 3606 true Chr02: 42703652-42707257 Phaseolus vulgaris
Phvul.002G254700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42706258-42707257 Phaseolus vulgaris
Phvul.002G254700 1.0kb downstream 1.0kb downstream 3606 true Chr02: 42702652-42706257 Phaseolus vulgaris
Phvul.002G254700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42702652-42703651 Phaseolus vulgaris
Phvul.002G254700 2.0kb upstream 2.0kb upstream 4606 true Chr02: 42703652-42708257 Phaseolus vulgaris
Phvul.002G254700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42706258-42708257 Phaseolus vulgaris
Phvul.002G254700 2.0kb downstream 2.0kb downstream 4606 true Chr02: 42701652-42706257 Phaseolus vulgaris
Phvul.002G254700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42701652-42703651 Phaseolus vulgaris
Phvul.002G254700 5.0kb upstream 5.0kb upstream 7606 true Chr02: 42703652-42711257 Phaseolus vulgaris
Phvul.002G254700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42706258-42711257 Phaseolus vulgaris
Phvul.002G254700 5.0kb downstream 5.0kb downstream 7606 true Chr02: 42698652-42706257 Phaseolus vulgaris
Phvul.002G254700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42698652-42703651 Phaseolus vulgaris
Phvul.002G254700 10.0kb upstream 10.0kb upstream 12606 true Chr02: 42703652-42716257 Phaseolus vulgaris
Phvul.002G254700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42706258-42716257 Phaseolus vulgaris
Phvul.002G254700 10.0kb downstream 10.0kb downstream 12606 true Chr02: 42693652-42706257 Phaseolus vulgaris
Phvul.002G254700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42693652-42703651 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311047 5265 Fabidae View MSA
124069975 5270 Rosid View MSA
123750267 5271 Pentapetalae View MSA
122794981 5272 Eudicot View MSA
122048174 5273 Angiosperm View MSA
121350948 5274 Embryophyte View MSA
123381944 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.7404 0.0 28.2847    
cufflinks 4.54165 0.0 12.8234    
cufflinks 0.913532 0.0 3.07694   Low
cufflinks 1.62832 0.0 5.11473   Low
cufflinks 21.6851 0.0 56.0628   High
cufflinks 6.24972 0.0 17.1241    
cufflinks 11.8656 0.0 30.9792    
cufflinks 6.18969 0.0 16.9383    
cufflinks 6.82873 0.0 18.4924    
cufflinks 17.4496 0.0 45.1667    
cufflinks 13.3064 0.0 34.6772    

0 Strain