Gene : Phvul.002G255400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22904:SF379 - RING ZINC FINGER-CONTAINING PROTEIN Genomic Order:  2529
Name:  ? Phvul.002G255400 Secondary Identifier:  ? PAC:37177539
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G255400 0.5kb upstream 0.5kb upstream 5454 true Chr02: 42769168-42774621 Phaseolus vulgaris
Phvul.002G255400 0.5kb upstream 0.5kb upstream 500 false Chr02: 42769168-42769667 Phaseolus vulgaris
Phvul.002G255400 0.5kb downstream 0.5kb downstream 5454 true Chr02: 42769668-42775121 Phaseolus vulgaris
Phvul.002G255400 0.5kb downstream 0.5kb downstream 500 false Chr02: 42774622-42775121 Phaseolus vulgaris
Phvul.002G255400 1.0kb upstream 1.0kb upstream 5954 true Chr02: 42768668-42774621 Phaseolus vulgaris
Phvul.002G255400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42768668-42769667 Phaseolus vulgaris
Phvul.002G255400 1.0kb downstream 1.0kb downstream 5954 true Chr02: 42769668-42775621 Phaseolus vulgaris
Phvul.002G255400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42774622-42775621 Phaseolus vulgaris
Phvul.002G255400 2.0kb upstream 2.0kb upstream 6954 true Chr02: 42767668-42774621 Phaseolus vulgaris
Phvul.002G255400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42767668-42769667 Phaseolus vulgaris
Phvul.002G255400 2.0kb downstream 2.0kb downstream 6954 true Chr02: 42769668-42776621 Phaseolus vulgaris
Phvul.002G255400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42774622-42776621 Phaseolus vulgaris
Phvul.002G255400 5.0kb upstream 5.0kb upstream 9954 true Chr02: 42764668-42774621 Phaseolus vulgaris
Phvul.002G255400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42764668-42769667 Phaseolus vulgaris
Phvul.002G255400 5.0kb downstream 5.0kb downstream 9954 true Chr02: 42769668-42779621 Phaseolus vulgaris
Phvul.002G255400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42774622-42779621 Phaseolus vulgaris
Phvul.002G255400 10.0kb upstream 10.0kb upstream 14954 true Chr02: 42759668-42774621 Phaseolus vulgaris
Phvul.002G255400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42759668-42769667 Phaseolus vulgaris
Phvul.002G255400 10.0kb downstream 10.0kb downstream 14954 true Chr02: 42769668-42784621 Phaseolus vulgaris
Phvul.002G255400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42774622-42784621 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041067 5273 Angiosperm View MSA
122305435 5265 Fabidae View MSA
124050138 5270 Rosid View MSA
123736944 5271 Pentapetalae View MSA
122792971 5272 Eudicot View MSA
121347266 5274 Embryophyte View MSA
123380522 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.85161 0.0 20.8103   Low
cufflinks 17.3959 0.0 44.9704    
cufflinks 10.3441 0.0 26.9891    
cufflinks 12.2284 0.0 31.8081    
cufflinks 22.8999 0.0 59.3958    
cufflinks 15.895 0.0 41.0876    
cufflinks 15.9374 0.0 41.199    
cufflinks 3.82641 0.0 10.7441   Low
cufflinks 22.0811 0.0 57.2387    
cufflinks 26.7229 0.0 69.8017   High
cufflinks 19.588 0.0 50.6683    

0 Strain