Gene : Phvul.003G038100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31923:SF7 - BSD DOMAIN-CONTAINING PROTEIN Genomic Order:  388
Name:  ? Phvul.003G038100 Secondary Identifier:  ? PAC:37144584
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G038100 0.5kb upstream 0.5kb upstream 7320 true Chr03: 3991390-3998709 Phaseolus vulgaris
Phvul.003G038100 0.5kb upstream 0.5kb upstream 500 false Chr03: 3998210-3998709 Phaseolus vulgaris
Phvul.003G038100 0.5kb downstream 0.5kb downstream 7320 true Chr03: 3990890-3998209 Phaseolus vulgaris
Phvul.003G038100 0.5kb downstream 0.5kb downstream 500 false Chr03: 3990890-3991389 Phaseolus vulgaris
Phvul.003G038100 1.0kb upstream 1.0kb upstream 7820 true Chr03: 3991390-3999209 Phaseolus vulgaris
Phvul.003G038100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 3998210-3999209 Phaseolus vulgaris
Phvul.003G038100 1.0kb downstream 1.0kb downstream 7820 true Chr03: 3990390-3998209 Phaseolus vulgaris
Phvul.003G038100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 3990390-3991389 Phaseolus vulgaris
Phvul.003G038100 2.0kb upstream 2.0kb upstream 8820 true Chr03: 3991390-4000209 Phaseolus vulgaris
Phvul.003G038100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 3998210-4000209 Phaseolus vulgaris
Phvul.003G038100 2.0kb downstream 2.0kb downstream 8820 true Chr03: 3989390-3998209 Phaseolus vulgaris
Phvul.003G038100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 3989390-3991389 Phaseolus vulgaris
Phvul.003G038100 5.0kb upstream 5.0kb upstream 11820 true Chr03: 3991390-4003209 Phaseolus vulgaris
Phvul.003G038100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 3998210-4003209 Phaseolus vulgaris
Phvul.003G038100 5.0kb downstream 5.0kb downstream 11820 true Chr03: 3986390-3998209 Phaseolus vulgaris
Phvul.003G038100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 3986390-3991389 Phaseolus vulgaris
Phvul.003G038100 10.0kb upstream 10.0kb upstream 16820 true Chr03: 3991390-4008209 Phaseolus vulgaris
Phvul.003G038100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 3998210-4008209 Phaseolus vulgaris
Phvul.003G038100 10.0kb downstream 10.0kb downstream 16820 true Chr03: 3981390-3998209 Phaseolus vulgaris
Phvul.003G038100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 3981390-3991389 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304972 5265 Fabidae View MSA
124072325 5270 Rosid View MSA
123741751 5271 Pentapetalae View MSA
122788146 5272 Eudicot View MSA
122043201 5273 Angiosperm View MSA
121345740 5274 Embryophyte View MSA
123425490 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.0471 0.0 42.155   Low
cufflinks 28.7245 0.0 74.2525    
cufflinks 25.1588 0.0 65.115    
cufflinks 32.8106 0.0 84.8584    
cufflinks 35.7953 0.0 92.6139 High  
cufflinks 32.0569 0.0 82.879    
cufflinks 23.6033 0.0 61.1273    
cufflinks 23.0549 0.0 59.7494    
cufflinks 27.7075 0.0 71.6324    
cufflinks 28.1681 0.0 72.8251    
cufflinks 45.8745 0.0 119.571 High High

0 Strain