Gene : Phvul.003G026800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR12565//PTHR12565:SF139 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  276
Name:  ? Phvul.003G026800 Secondary Identifier:  ? PAC:37146812
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G026800 0.5kb upstream 0.5kb upstream 4720 true Chr03: 2576633-2581352 Phaseolus vulgaris
Phvul.003G026800 0.5kb upstream 0.5kb upstream 500 false Chr03: 2576633-2577132 Phaseolus vulgaris
Phvul.003G026800 0.5kb downstream 0.5kb downstream 4720 true Chr03: 2577133-2581852 Phaseolus vulgaris
Phvul.003G026800 0.5kb downstream 0.5kb downstream 500 false Chr03: 2581353-2581852 Phaseolus vulgaris
Phvul.003G026800 1.0kb upstream 1.0kb upstream 5220 true Chr03: 2576133-2581352 Phaseolus vulgaris
Phvul.003G026800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 2576133-2577132 Phaseolus vulgaris
Phvul.003G026800 1.0kb downstream 1.0kb downstream 5220 true Chr03: 2577133-2582352 Phaseolus vulgaris
Phvul.003G026800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 2581353-2582352 Phaseolus vulgaris
Phvul.003G026800 2.0kb upstream 2.0kb upstream 6220 true Chr03: 2575133-2581352 Phaseolus vulgaris
Phvul.003G026800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 2575133-2577132 Phaseolus vulgaris
Phvul.003G026800 2.0kb downstream 2.0kb downstream 6220 true Chr03: 2577133-2583352 Phaseolus vulgaris
Phvul.003G026800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 2581353-2583352 Phaseolus vulgaris
Phvul.003G026800 5.0kb upstream 5.0kb upstream 9220 true Chr03: 2572133-2581352 Phaseolus vulgaris
Phvul.003G026800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 2572133-2577132 Phaseolus vulgaris
Phvul.003G026800 5.0kb downstream 5.0kb downstream 9220 true Chr03: 2577133-2586352 Phaseolus vulgaris
Phvul.003G026800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 2581353-2586352 Phaseolus vulgaris
Phvul.003G026800 10.0kb upstream 10.0kb upstream 14220 true Chr03: 2567133-2581352 Phaseolus vulgaris
Phvul.003G026800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 2567133-2577132 Phaseolus vulgaris
Phvul.003G026800 10.0kb downstream 10.0kb downstream 14220 true Chr03: 2577133-2591352 Phaseolus vulgaris
Phvul.003G026800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 2581353-2591352 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311698 5265 Fabidae View MSA
124065415 5270 Rosid View MSA
123749080 5271 Pentapetalae View MSA
122789211 5272 Eudicot View MSA
122048947 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.487277 0.0 3.11479    
cufflinks 0.49014 0.0 3.10968 Low  
cufflinks 0.231392 0.0 0.919348 Low  
cufflinks 0.0405299 0.0 0.200907 Low Low
cufflinks 1.08524 0.0 5.7259    
cufflinks 1.46438 0.0 7.03064    
cufflinks 0.752797 0.0 4.25387    
cufflinks 1.93436 0.0 8.51272   High
cufflinks 0.650914 0.0 3.80206    
cufflinks 0.0239219 0.0 0.140085 Low Low
cufflinks 0.765618 0.0 4.38477    

0 Strain