Gene : Phvul.003G027500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR27003:SF5 - DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN Genomic Order:  283
Name:  ? Phvul.003G027500 Secondary Identifier:  ? PAC:37147897
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G027500 0.5kb upstream 0.5kb upstream 13656 true Chr03: 2641277-2654932 Phaseolus vulgaris
Phvul.003G027500 0.5kb upstream 0.5kb upstream 500 false Chr03: 2641277-2641776 Phaseolus vulgaris
Phvul.003G027500 0.5kb downstream 0.5kb downstream 13656 true Chr03: 2641777-2655432 Phaseolus vulgaris
Phvul.003G027500 0.5kb downstream 0.5kb downstream 500 false Chr03: 2654933-2655432 Phaseolus vulgaris
Phvul.003G027500 1.0kb upstream 1.0kb upstream 14156 true Chr03: 2640777-2654932 Phaseolus vulgaris
Phvul.003G027500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 2640777-2641776 Phaseolus vulgaris
Phvul.003G027500 1.0kb downstream 1.0kb downstream 14156 true Chr03: 2641777-2655932 Phaseolus vulgaris
Phvul.003G027500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 2654933-2655932 Phaseolus vulgaris
Phvul.003G027500 2.0kb upstream 2.0kb upstream 15156 true Chr03: 2639777-2654932 Phaseolus vulgaris
Phvul.003G027500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 2639777-2641776 Phaseolus vulgaris
Phvul.003G027500 2.0kb downstream 2.0kb downstream 15156 true Chr03: 2641777-2656932 Phaseolus vulgaris
Phvul.003G027500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 2654933-2656932 Phaseolus vulgaris
Phvul.003G027500 5.0kb upstream 5.0kb upstream 18156 true Chr03: 2636777-2654932 Phaseolus vulgaris
Phvul.003G027500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 2636777-2641776 Phaseolus vulgaris
Phvul.003G027500 5.0kb downstream 5.0kb downstream 18156 true Chr03: 2641777-2659932 Phaseolus vulgaris
Phvul.003G027500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 2654933-2659932 Phaseolus vulgaris
Phvul.003G027500 10.0kb upstream 10.0kb upstream 23156 true Chr03: 2631777-2654932 Phaseolus vulgaris
Phvul.003G027500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 2631777-2641776 Phaseolus vulgaris
Phvul.003G027500 10.0kb downstream 10.0kb downstream 23156 true Chr03: 2641777-2664932 Phaseolus vulgaris
Phvul.003G027500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 2654933-2664932 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305609 5265 Fabidae View MSA
124063346 5270 Rosid View MSA
123750625 5271 Pentapetalae View MSA
122787899 5272 Eudicot View MSA
122042080 5273 Angiosperm View MSA
121348136 5274 Embryophyte View MSA
123380739 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.555 0.0 14.9954   Low
cufflinks 11.3509 0.0 29.4443    
cufflinks 15.3087 0.0 39.5714    
cufflinks 7.29815 0.0 19.2792   Low
cufflinks 14.4751 0.0 37.4163    
cufflinks 12.7186 0.0 32.9197    
cufflinks 13.2473 0.0 34.248    
cufflinks 14.4454 0.0 37.3404    
cufflinks 13.4051 0.0 34.6602    
cufflinks 14.6769 0.0 37.9376    
cufflinks 14.7131 0.0 38.0307    

0 Strain