Gene : Phvul.003G026100 P. vulgaris v2.1
Defline:  (1 of 3) PTHR31342:SF7 - PROTEIN CHUP1, CHLOROPLASTIC Genomic Order:  269
Name:  ? Phvul.003G026100 Secondary Identifier:  ? PAC:37144368
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G026100 0.5kb upstream 0.5kb upstream 6606 true Chr03: 2519459-2526064 Phaseolus vulgaris
Phvul.003G026100 0.5kb upstream 0.5kb upstream 500 false Chr03: 2519459-2519958 Phaseolus vulgaris
Phvul.003G026100 0.5kb downstream 0.5kb downstream 6606 true Chr03: 2519959-2526564 Phaseolus vulgaris
Phvul.003G026100 0.5kb downstream 0.5kb downstream 500 false Chr03: 2526065-2526564 Phaseolus vulgaris
Phvul.003G026100 1.0kb upstream 1.0kb upstream 7106 true Chr03: 2518959-2526064 Phaseolus vulgaris
Phvul.003G026100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 2518959-2519958 Phaseolus vulgaris
Phvul.003G026100 1.0kb downstream 1.0kb downstream 7106 true Chr03: 2519959-2527064 Phaseolus vulgaris
Phvul.003G026100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 2526065-2527064 Phaseolus vulgaris
Phvul.003G026100 2.0kb upstream 2.0kb upstream 8106 true Chr03: 2517959-2526064 Phaseolus vulgaris
Phvul.003G026100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 2517959-2519958 Phaseolus vulgaris
Phvul.003G026100 2.0kb downstream 2.0kb downstream 8106 true Chr03: 2519959-2528064 Phaseolus vulgaris
Phvul.003G026100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 2526065-2528064 Phaseolus vulgaris
Phvul.003G026100 5.0kb upstream 5.0kb upstream 11106 true Chr03: 2514959-2526064 Phaseolus vulgaris
Phvul.003G026100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 2514959-2519958 Phaseolus vulgaris
Phvul.003G026100 5.0kb downstream 5.0kb downstream 11106 true Chr03: 2519959-2531064 Phaseolus vulgaris
Phvul.003G026100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 2526065-2531064 Phaseolus vulgaris
Phvul.003G026100 10.0kb upstream 10.0kb upstream 16106 true Chr03: 2509959-2526064 Phaseolus vulgaris
Phvul.003G026100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 2509959-2519958 Phaseolus vulgaris
Phvul.003G026100 10.0kb downstream 10.0kb downstream 16106 true Chr03: 2519959-2536064 Phaseolus vulgaris
Phvul.003G026100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 2526065-2536064 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301701 5265 Fabidae View MSA
124062330 5270 Rosid View MSA
123739628 5271 Pentapetalae View MSA
122790649 5272 Eudicot View MSA
122047771 5273 Angiosperm View MSA
121348939 5274 Embryophyte View MSA
123381088 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.8365 0.0 38.5097    
cufflinks 2.94917 0.0 8.17942    
cufflinks 201.373 0.0 751.368 High High
cufflinks 1.45161 0.0 4.38584    
cufflinks 9.00263 0.0 23.3481    
cufflinks 56.7927 0.0 165.959 High High
cufflinks 1.10814 0.0 3.39429    
cufflinks 0.753692 0.0 2.40448   Low
cufflinks 0.949189 0.0 2.96508   Low
cufflinks 31.1252 0.0 84.5191    
cufflinks 4.3907 0.0 11.8196    

0 Strain