Gene : Phvul.003G028800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22952:SF209 - BZIP TRANSCRIPTION FACTOR Genomic Order:  296
Name:  ? Phvul.003G028800 Secondary Identifier:  ? PAC:37144669
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G028800 0.5kb upstream 0.5kb upstream 5377 true Chr03: 2891610-2896986 Phaseolus vulgaris
Phvul.003G028800 0.5kb upstream 0.5kb upstream 500 false Chr03: 2891610-2892109 Phaseolus vulgaris
Phvul.003G028800 0.5kb downstream 0.5kb downstream 5377 true Chr03: 2892110-2897486 Phaseolus vulgaris
Phvul.003G028800 0.5kb downstream 0.5kb downstream 500 false Chr03: 2896987-2897486 Phaseolus vulgaris
Phvul.003G028800 1.0kb upstream 1.0kb upstream 5877 true Chr03: 2891110-2896986 Phaseolus vulgaris
Phvul.003G028800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 2891110-2892109 Phaseolus vulgaris
Phvul.003G028800 1.0kb downstream 1.0kb downstream 5877 true Chr03: 2892110-2897986 Phaseolus vulgaris
Phvul.003G028800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 2896987-2897986 Phaseolus vulgaris
Phvul.003G028800 2.0kb upstream 2.0kb upstream 6877 true Chr03: 2890110-2896986 Phaseolus vulgaris
Phvul.003G028800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 2890110-2892109 Phaseolus vulgaris
Phvul.003G028800 2.0kb downstream 2.0kb downstream 6877 true Chr03: 2892110-2898986 Phaseolus vulgaris
Phvul.003G028800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 2896987-2898986 Phaseolus vulgaris
Phvul.003G028800 5.0kb upstream 5.0kb upstream 9877 true Chr03: 2887110-2896986 Phaseolus vulgaris
Phvul.003G028800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 2887110-2892109 Phaseolus vulgaris
Phvul.003G028800 5.0kb downstream 5.0kb downstream 9877 true Chr03: 2892110-2901986 Phaseolus vulgaris
Phvul.003G028800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 2896987-2901986 Phaseolus vulgaris
Phvul.003G028800 10.0kb upstream 10.0kb upstream 14877 true Chr03: 2882110-2896986 Phaseolus vulgaris
Phvul.003G028800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 2882110-2892109 Phaseolus vulgaris
Phvul.003G028800 10.0kb downstream 10.0kb downstream 14877 true Chr03: 2892110-2906986 Phaseolus vulgaris
Phvul.003G028800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 2896987-2906986 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310454 5265 Fabidae View MSA
124070852 5270 Rosid View MSA
123737642 5271 Pentapetalae View MSA
122795655 5272 Eudicot View MSA
122048650 5273 Angiosperm View MSA
121349382 5274 Embryophyte View MSA
123426504 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.036435 0.0 0.170108 Low  
cufflinks 0.100261 0.0 0.419502 Low  
cufflinks 0.125578 0.0 0.51485 Low  
cufflinks 0.069588 0.0 0.303059 Low  
cufflinks 0.206753 0.0 0.825695 Low  
cufflinks 0.0746032 0.0 0.328035 Low  
cufflinks 7.87205 0.0 28.7561   High
cufflinks 28.9755 0.0 93.3927 High High
cufflinks 0.0855493 0.0 0.362754 Low  
cufflinks 0.160985 0.0 0.647854 Low  
cufflinks 0.240613 0.0 0.94095 Low  

0 Strain