Gene : Phvul.003G029900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24089:SF398 - NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 2, MITOCHONDRIAL Genomic Order:  307
Name:  ? Phvul.003G029900 Secondary Identifier:  ? PAC:37145234
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G029900 0.5kb upstream 0.5kb upstream 4987 true Chr03: 3000184-3005170 Phaseolus vulgaris
Phvul.003G029900 0.5kb upstream 0.5kb upstream 500 false Chr03: 3000184-3000683 Phaseolus vulgaris
Phvul.003G029900 0.5kb downstream 0.5kb downstream 4987 true Chr03: 3000684-3005670 Phaseolus vulgaris
Phvul.003G029900 0.5kb downstream 0.5kb downstream 500 false Chr03: 3005171-3005670 Phaseolus vulgaris
Phvul.003G029900 1.0kb upstream 1.0kb upstream 5487 true Chr03: 2999684-3005170 Phaseolus vulgaris
Phvul.003G029900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 2999684-3000683 Phaseolus vulgaris
Phvul.003G029900 1.0kb downstream 1.0kb downstream 5487 true Chr03: 3000684-3006170 Phaseolus vulgaris
Phvul.003G029900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 3005171-3006170 Phaseolus vulgaris
Phvul.003G029900 2.0kb upstream 2.0kb upstream 6487 true Chr03: 2998684-3005170 Phaseolus vulgaris
Phvul.003G029900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 2998684-3000683 Phaseolus vulgaris
Phvul.003G029900 2.0kb downstream 2.0kb downstream 6487 true Chr03: 3000684-3007170 Phaseolus vulgaris
Phvul.003G029900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 3005171-3007170 Phaseolus vulgaris
Phvul.003G029900 5.0kb upstream 5.0kb upstream 9487 true Chr03: 2995684-3005170 Phaseolus vulgaris
Phvul.003G029900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 2995684-3000683 Phaseolus vulgaris
Phvul.003G029900 5.0kb downstream 5.0kb downstream 9487 true Chr03: 3000684-3010170 Phaseolus vulgaris
Phvul.003G029900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 3005171-3010170 Phaseolus vulgaris
Phvul.003G029900 10.0kb upstream 10.0kb upstream 14487 true Chr03: 2990684-3005170 Phaseolus vulgaris
Phvul.003G029900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 2990684-3000683 Phaseolus vulgaris
Phvul.003G029900 10.0kb downstream 10.0kb downstream 14487 true Chr03: 3000684-3015170 Phaseolus vulgaris
Phvul.003G029900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 3005171-3015170 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306278 5265 Fabidae View MSA
124068061 5270 Rosid View MSA
123745664 5271 Pentapetalae View MSA
122791332 5272 Eudicot View MSA
122049488 5273 Angiosperm View MSA
121343929 5274 Embryophyte View MSA
123425611 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.12202 0.0 9.39738    
cufflinks 2.07936 0.0 9.15203    
cufflinks 2.05581 0.0 8.99243    
cufflinks 1.74521 0.0 6.14129    
cufflinks 1.47287 0.0 5.4274   Low
cufflinks 2.76975 0.0 11.272    
cufflinks 2.79927 0.0 8.94574    
cufflinks 6.25498 0.0 24.8   High
cufflinks 2.21035 0.0 9.57107    
cufflinks 2.96036 0.0 12.2458    
cufflinks 2.17675 0.0 9.57698    

0 Strain