Gene : Phvul.003G031800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR33270:SF5 - GB Genomic Order:  324
Name:  ? Phvul.003G031800 Secondary Identifier:  ? PAC:37147765
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G031800 0.5kb upstream 0.5kb upstream 1853 true Chr03: 3219621-3221473 Phaseolus vulgaris
Phvul.003G031800 0.5kb upstream 0.5kb upstream 500 false Chr03: 3220974-3221473 Phaseolus vulgaris
Phvul.003G031800 0.5kb downstream 0.5kb downstream 1853 true Chr03: 3219121-3220973 Phaseolus vulgaris
Phvul.003G031800 0.5kb downstream 0.5kb downstream 500 false Chr03: 3219121-3219620 Phaseolus vulgaris
Phvul.003G031800 1.0kb upstream 1.0kb upstream 2353 true Chr03: 3219621-3221973 Phaseolus vulgaris
Phvul.003G031800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 3220974-3221973 Phaseolus vulgaris
Phvul.003G031800 1.0kb downstream 1.0kb downstream 2353 true Chr03: 3218621-3220973 Phaseolus vulgaris
Phvul.003G031800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 3218621-3219620 Phaseolus vulgaris
Phvul.003G031800 2.0kb upstream 2.0kb upstream 3353 true Chr03: 3219621-3222973 Phaseolus vulgaris
Phvul.003G031800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 3220974-3222973 Phaseolus vulgaris
Phvul.003G031800 2.0kb downstream 2.0kb downstream 3353 true Chr03: 3217621-3220973 Phaseolus vulgaris
Phvul.003G031800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 3217621-3219620 Phaseolus vulgaris
Phvul.003G031800 5.0kb upstream 5.0kb upstream 6353 true Chr03: 3219621-3225973 Phaseolus vulgaris
Phvul.003G031800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 3220974-3225973 Phaseolus vulgaris
Phvul.003G031800 5.0kb downstream 5.0kb downstream 6353 true Chr03: 3214621-3220973 Phaseolus vulgaris
Phvul.003G031800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 3214621-3219620 Phaseolus vulgaris
Phvul.003G031800 10.0kb upstream 10.0kb upstream 11353 true Chr03: 3219621-3230973 Phaseolus vulgaris
Phvul.003G031800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 3220974-3230973 Phaseolus vulgaris
Phvul.003G031800 10.0kb downstream 10.0kb downstream 11353 true Chr03: 3209621-3220973 Phaseolus vulgaris
Phvul.003G031800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 3209621-3219620 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304471 5265 Fabidae View MSA
124068577 5270 Rosid View MSA
123740302 5271 Pentapetalae View MSA
122797585 5272 Eudicot View MSA
122049795 5273 Angiosperm View MSA
121311591 5274 Embryophyte View MSA
123348867 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 79.4307 0.0 205.328 High High
cufflinks 38.7678 0.0 102.219 High  
cufflinks 11.4829 0.0 34.0086   Low
cufflinks 45.4743 0.0 118.66 High  
cufflinks 29.2876 0.0 78.9401    
cufflinks 16.9212 0.0 47.7898   Low
cufflinks 24.4432 0.0 66.3648    
cufflinks 26.6173 0.0 72.3233    
cufflinks 28.0669 0.0 75.3244    
cufflinks 31.579 0.0 84.4296    
cufflinks 30.5343 0.0 81.5217    

0 Strain