Gene : Phvul.003G018100 P. vulgaris v2.1
Defline:  (1 of 7) PF07058 - Microtubule-associated protein 70 (MAP70) Genomic Order:  188
Name:  ? Phvul.003G018100 Secondary Identifier:  ? PAC:37147602
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G018100 0.5kb upstream 0.5kb upstream 6741 true Chr03: 1728162-1734902 Phaseolus vulgaris
Phvul.003G018100 0.5kb upstream 0.5kb upstream 500 false Chr03: 1734403-1734902 Phaseolus vulgaris
Phvul.003G018100 0.5kb downstream 0.5kb downstream 6741 true Chr03: 1727662-1734402 Phaseolus vulgaris
Phvul.003G018100 0.5kb downstream 0.5kb downstream 500 false Chr03: 1727662-1728161 Phaseolus vulgaris
Phvul.003G018100 1.0kb upstream 1.0kb upstream 7241 true Chr03: 1728162-1735402 Phaseolus vulgaris
Phvul.003G018100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1734403-1735402 Phaseolus vulgaris
Phvul.003G018100 1.0kb downstream 1.0kb downstream 7241 true Chr03: 1727162-1734402 Phaseolus vulgaris
Phvul.003G018100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1727162-1728161 Phaseolus vulgaris
Phvul.003G018100 2.0kb upstream 2.0kb upstream 8241 true Chr03: 1728162-1736402 Phaseolus vulgaris
Phvul.003G018100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1734403-1736402 Phaseolus vulgaris
Phvul.003G018100 2.0kb downstream 2.0kb downstream 8241 true Chr03: 1726162-1734402 Phaseolus vulgaris
Phvul.003G018100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1726162-1728161 Phaseolus vulgaris
Phvul.003G018100 5.0kb upstream 5.0kb upstream 11241 true Chr03: 1728162-1739402 Phaseolus vulgaris
Phvul.003G018100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1734403-1739402 Phaseolus vulgaris
Phvul.003G018100 5.0kb downstream 5.0kb downstream 11241 true Chr03: 1723162-1734402 Phaseolus vulgaris
Phvul.003G018100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1723162-1728161 Phaseolus vulgaris
Phvul.003G018100 10.0kb upstream 10.0kb upstream 16241 true Chr03: 1728162-1744402 Phaseolus vulgaris
Phvul.003G018100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1734403-1744402 Phaseolus vulgaris
Phvul.003G018100 10.0kb downstream 10.0kb downstream 16241 true Chr03: 1718162-1734402 Phaseolus vulgaris
Phvul.003G018100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1718162-1728161 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310839 5265 Fabidae View MSA
124063573 5270 Rosid View MSA
123742217 5271 Pentapetalae View MSA
122793653 5272 Eudicot View MSA
122043033 5273 Angiosperm View MSA
123428932 5275 Viridiplantae View MSA
121344979 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.64635 0.0 22.3802   Low
cufflinks 30.3419 0.0 107.016    
cufflinks 43.9134 0.0 137.157 High High
cufflinks 11.4202 0.0 32.2247   Low
cufflinks 26.1242 0.0 90.9197    
cufflinks 41.1669 0.0 155.8 High High
cufflinks 25.5451 0.0 90.6505    
cufflinks 20.4616 0.0 69.8554    
cufflinks 24.5051 0.0 84.5403    
cufflinks 28.0009 0.0 96.8931    
cufflinks 29.7004 0.0 105.368    

0 Strain