Gene : Phvul.003G017000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR26402:SF584 - TWO-COMPONENT RESPONSE REGULATOR ARR14 Genomic Order:  178
Name:  ? Phvul.003G017000 Secondary Identifier:  ? PAC:37147700
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G017000 0.5kb upstream 0.5kb upstream 4670 true Chr03: 1669187-1673856 Phaseolus vulgaris
Phvul.003G017000 0.5kb upstream 0.5kb upstream 500 false Chr03: 1673357-1673856 Phaseolus vulgaris
Phvul.003G017000 0.5kb downstream 0.5kb downstream 4670 true Chr03: 1668687-1673356 Phaseolus vulgaris
Phvul.003G017000 0.5kb downstream 0.5kb downstream 500 false Chr03: 1668687-1669186 Phaseolus vulgaris
Phvul.003G017000 1.0kb upstream 1.0kb upstream 5170 true Chr03: 1669187-1674356 Phaseolus vulgaris
Phvul.003G017000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1673357-1674356 Phaseolus vulgaris
Phvul.003G017000 1.0kb downstream 1.0kb downstream 5170 true Chr03: 1668187-1673356 Phaseolus vulgaris
Phvul.003G017000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1668187-1669186 Phaseolus vulgaris
Phvul.003G017000 2.0kb upstream 2.0kb upstream 6170 true Chr03: 1669187-1675356 Phaseolus vulgaris
Phvul.003G017000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1673357-1675356 Phaseolus vulgaris
Phvul.003G017000 2.0kb downstream 2.0kb downstream 6170 true Chr03: 1667187-1673356 Phaseolus vulgaris
Phvul.003G017000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1667187-1669186 Phaseolus vulgaris
Phvul.003G017000 5.0kb upstream 5.0kb upstream 9170 true Chr03: 1669187-1678356 Phaseolus vulgaris
Phvul.003G017000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1673357-1678356 Phaseolus vulgaris
Phvul.003G017000 5.0kb downstream 5.0kb downstream 9170 true Chr03: 1664187-1673356 Phaseolus vulgaris
Phvul.003G017000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1664187-1669186 Phaseolus vulgaris
Phvul.003G017000 10.0kb upstream 10.0kb upstream 14170 true Chr03: 1669187-1683356 Phaseolus vulgaris
Phvul.003G017000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1673357-1683356 Phaseolus vulgaris
Phvul.003G017000 10.0kb downstream 10.0kb downstream 14170 true Chr03: 1659187-1673356 Phaseolus vulgaris
Phvul.003G017000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1659187-1669186 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299957 5265 Fabidae View MSA
124070462 5270 Rosid View MSA
123742267 5271 Pentapetalae View MSA
122795126 5272 Eudicot View MSA
122048546 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121351259 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.60142 0.0 10.5128    
cufflinks 5.63443 0.0 15.7308    
cufflinks 9.09392 0.0 24.3429   High
cufflinks 2.33075 0.0 7.20251   Low
cufflinks 4.97599 0.0 14.1419    
cufflinks 7.99166 0.0 21.6311   High
cufflinks 4.74256 0.0 13.4472    
cufflinks 4.53715 0.0 12.8733    
cufflinks 3.48753 0.0 10.2258    
cufflinks 5.33343 0.0 14.9596    
cufflinks 5.46763 0.0 15.3691    

0 Strain