Gene : Phvul.003G020600 P. vulgaris v2.1
Defline:  (1 of 4) K02941 - large subunit ribosomal protein LP0 (RP-LP0, RPLP0) Genomic Order:  215
Name:  ? Phvul.003G020600 Secondary Identifier:  ? PAC:37146944
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G020600 0.5kb upstream 0.5kb upstream 2797 true Chr03: 1964205-1967001 Phaseolus vulgaris
Phvul.003G020600 0.5kb upstream 0.5kb upstream 500 false Chr03: 1966502-1967001 Phaseolus vulgaris
Phvul.003G020600 0.5kb downstream 0.5kb downstream 2797 true Chr03: 1963705-1966501 Phaseolus vulgaris
Phvul.003G020600 0.5kb downstream 0.5kb downstream 500 false Chr03: 1963705-1964204 Phaseolus vulgaris
Phvul.003G020600 1.0kb upstream 1.0kb upstream 3297 true Chr03: 1964205-1967501 Phaseolus vulgaris
Phvul.003G020600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1966502-1967501 Phaseolus vulgaris
Phvul.003G020600 1.0kb downstream 1.0kb downstream 3297 true Chr03: 1963205-1966501 Phaseolus vulgaris
Phvul.003G020600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1963205-1964204 Phaseolus vulgaris
Phvul.003G020600 2.0kb upstream 2.0kb upstream 4297 true Chr03: 1964205-1968501 Phaseolus vulgaris
Phvul.003G020600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1966502-1968501 Phaseolus vulgaris
Phvul.003G020600 2.0kb downstream 2.0kb downstream 4297 true Chr03: 1962205-1966501 Phaseolus vulgaris
Phvul.003G020600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1962205-1964204 Phaseolus vulgaris
Phvul.003G020600 5.0kb upstream 5.0kb upstream 7297 true Chr03: 1964205-1971501 Phaseolus vulgaris
Phvul.003G020600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1966502-1971501 Phaseolus vulgaris
Phvul.003G020600 5.0kb downstream 5.0kb downstream 7297 true Chr03: 1959205-1966501 Phaseolus vulgaris
Phvul.003G020600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1959205-1964204 Phaseolus vulgaris
Phvul.003G020600 10.0kb upstream 10.0kb upstream 12297 true Chr03: 1964205-1976501 Phaseolus vulgaris
Phvul.003G020600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1966502-1976501 Phaseolus vulgaris
Phvul.003G020600 10.0kb downstream 10.0kb downstream 12297 true Chr03: 1954205-1966501 Phaseolus vulgaris
Phvul.003G020600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1954205-1964204 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306740 5265 Fabidae View MSA
124061567 5270 Rosid View MSA
123747108 5271 Pentapetalae View MSA
122786385 5272 Eudicot View MSA
122042027 5273 Angiosperm View MSA
121345246 5274 Embryophyte View MSA
123428323 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 274.042 0.0 860.253 High  
cufflinks 461.356 0.0 1603.72 High High
cufflinks 204.463 0.0 611.767 High Low
cufflinks 484.172 0.0 1710.39 High High
cufflinks 380.431 0.0 1272.11 High  
cufflinks 252.055 0.0 778.266 High  
cufflinks 254.998 0.0 794.504 High  
cufflinks 276.616 0.0 866.847 High  
cufflinks 446.148 0.0 1549.44 High High
cufflinks 187.558 0.0 552.974 High Low
cufflinks 359.747 0.0 1188.93 High  

0 Strain