Gene : Phvul.003G019700 P. vulgaris v2.1
Defline:  (1 of 5) PF07676 - WD40-like Beta Propeller Repeat (PD40) Genomic Order:  206
Name:  ? Phvul.003G019700 Secondary Identifier:  ? PAC:37147646
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G019700 0.5kb upstream 0.5kb upstream 2608 true Chr03: 1895278-1897885 Phaseolus vulgaris
Phvul.003G019700 0.5kb upstream 0.5kb upstream 500 false Chr03: 1895278-1895777 Phaseolus vulgaris
Phvul.003G019700 0.5kb downstream 0.5kb downstream 2608 true Chr03: 1895778-1898385 Phaseolus vulgaris
Phvul.003G019700 0.5kb downstream 0.5kb downstream 500 false Chr03: 1897886-1898385 Phaseolus vulgaris
Phvul.003G019700 1.0kb upstream 1.0kb upstream 3108 true Chr03: 1894778-1897885 Phaseolus vulgaris
Phvul.003G019700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1894778-1895777 Phaseolus vulgaris
Phvul.003G019700 1.0kb downstream 1.0kb downstream 3108 true Chr03: 1895778-1898885 Phaseolus vulgaris
Phvul.003G019700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1897886-1898885 Phaseolus vulgaris
Phvul.003G019700 2.0kb upstream 2.0kb upstream 4108 true Chr03: 1893778-1897885 Phaseolus vulgaris
Phvul.003G019700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1893778-1895777 Phaseolus vulgaris
Phvul.003G019700 2.0kb downstream 2.0kb downstream 4108 true Chr03: 1895778-1899885 Phaseolus vulgaris
Phvul.003G019700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1897886-1899885 Phaseolus vulgaris
Phvul.003G019700 5.0kb upstream 5.0kb upstream 7108 true Chr03: 1890778-1897885 Phaseolus vulgaris
Phvul.003G019700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1890778-1895777 Phaseolus vulgaris
Phvul.003G019700 5.0kb downstream 5.0kb downstream 7108 true Chr03: 1895778-1902885 Phaseolus vulgaris
Phvul.003G019700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1897886-1902885 Phaseolus vulgaris
Phvul.003G019700 10.0kb upstream 10.0kb upstream 12108 true Chr03: 1885778-1897885 Phaseolus vulgaris
Phvul.003G019700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1885778-1895777 Phaseolus vulgaris
Phvul.003G019700 10.0kb downstream 10.0kb downstream 12108 true Chr03: 1895778-1907885 Phaseolus vulgaris
Phvul.003G019700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1897886-1907885 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304143 5265 Fabidae View MSA
124062659 5270 Rosid View MSA
123740244 5271 Pentapetalae View MSA
122792271 5272 Eudicot View MSA
122050472 5273 Angiosperm View MSA
121347738 5274 Embryophyte View MSA
123424154 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 137.848 0.0 436.913 High High
cufflinks 47.7913 0.0 130.483 High  
cufflinks 10.0405 0.0 26.3297    
cufflinks 11.2273 0.0 29.131    
cufflinks 29.3269 0.0 77.4114    
cufflinks 2.97714 0.0 8.58001   Low
cufflinks 31.5038 0.0 83.8811 High  
cufflinks 24.2807 0.0 63.2842    
cufflinks 54.1386 0.0 151.126 High  
cufflinks 31.7742 0.0 83.9988    
cufflinks 17.7137 0.0 45.8585    

0 Strain