Gene : Phvul.003G019600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10891//PTHR10891:SF631 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  205
Name:  ? Phvul.003G019600 Secondary Identifier:  ? PAC:37145481
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G019600 0.5kb upstream 0.5kb upstream 1483 true Chr03: 1890679-1892161 Phaseolus vulgaris
Phvul.003G019600 0.5kb upstream 0.5kb upstream 500 false Chr03: 1890679-1891178 Phaseolus vulgaris
Phvul.003G019600 0.5kb downstream 0.5kb downstream 1483 true Chr03: 1891179-1892661 Phaseolus vulgaris
Phvul.003G019600 0.5kb downstream 0.5kb downstream 500 false Chr03: 1892162-1892661 Phaseolus vulgaris
Phvul.003G019600 1.0kb upstream 1.0kb upstream 1983 true Chr03: 1890179-1892161 Phaseolus vulgaris
Phvul.003G019600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1890179-1891178 Phaseolus vulgaris
Phvul.003G019600 1.0kb downstream 1.0kb downstream 1983 true Chr03: 1891179-1893161 Phaseolus vulgaris
Phvul.003G019600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1892162-1893161 Phaseolus vulgaris
Phvul.003G019600 2.0kb upstream 2.0kb upstream 2983 true Chr03: 1889179-1892161 Phaseolus vulgaris
Phvul.003G019600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1889179-1891178 Phaseolus vulgaris
Phvul.003G019600 2.0kb downstream 2.0kb downstream 2983 true Chr03: 1891179-1894161 Phaseolus vulgaris
Phvul.003G019600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1892162-1894161 Phaseolus vulgaris
Phvul.003G019600 5.0kb upstream 5.0kb upstream 5983 true Chr03: 1886179-1892161 Phaseolus vulgaris
Phvul.003G019600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1886179-1891178 Phaseolus vulgaris
Phvul.003G019600 5.0kb downstream 5.0kb downstream 5983 true Chr03: 1891179-1897161 Phaseolus vulgaris
Phvul.003G019600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1892162-1897161 Phaseolus vulgaris
Phvul.003G019600 10.0kb upstream 10.0kb upstream 10983 true Chr03: 1881179-1892161 Phaseolus vulgaris
Phvul.003G019600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1881179-1891178 Phaseolus vulgaris
Phvul.003G019600 10.0kb downstream 10.0kb downstream 10983 true Chr03: 1891179-1902161 Phaseolus vulgaris
Phvul.003G019600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1892162-1902161 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312728 5265 Fabidae View MSA
124050277 5270 Rosid View MSA
123736874 5271 Pentapetalae View MSA
122791196 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.1496 0.0 34.0413   High
cufflinks 0.137416 0.0 0.594793 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 10.7016 0.0 30.1469   High
cufflinks 0.119708 0.0 0.524307 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.188685 0.0 0.787668 Low  
cufflinks 0.716059 0.0 2.71078    
cufflinks 0.318845 0.0 1.27343 Low  
cufflinks 0.0380513 0.0 0.187822 Low Low
cufflinks 0.0699689 0.0 0.32236 Low  

0 Strain