Gene : Phvul.003G020000 P. vulgaris v2.1
Defline:  (1 of 1) 1.14.20.2 - 2,4-dihydroxy-1,4-benzoxazin-3-one-glucoside dioxygenase / DIBOA-Glc dioxygenase Genomic Order:  209
Name:  ? Phvul.003G020000 Secondary Identifier:  ? PAC:37145675
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6950 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G020000 0.5kb upstream 0.5kb upstream 3317 true Chr03: 1919195-1922511 Phaseolus vulgaris
Phvul.003G020000 0.5kb upstream 0.5kb upstream 500 false Chr03: 1922012-1922511 Phaseolus vulgaris
Phvul.003G020000 0.5kb downstream 0.5kb downstream 3317 true Chr03: 1918695-1922011 Phaseolus vulgaris
Phvul.003G020000 0.5kb downstream 0.5kb downstream 500 false Chr03: 1918695-1919194 Phaseolus vulgaris
Phvul.003G020000 1.0kb upstream 1.0kb upstream 3817 true Chr03: 1919195-1923011 Phaseolus vulgaris
Phvul.003G020000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1922012-1923011 Phaseolus vulgaris
Phvul.003G020000 1.0kb downstream 1.0kb downstream 3817 true Chr03: 1918195-1922011 Phaseolus vulgaris
Phvul.003G020000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1918195-1919194 Phaseolus vulgaris
Phvul.003G020000 2.0kb upstream 2.0kb upstream 4817 true Chr03: 1919195-1924011 Phaseolus vulgaris
Phvul.003G020000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1922012-1924011 Phaseolus vulgaris
Phvul.003G020000 2.0kb downstream 2.0kb downstream 4817 true Chr03: 1917195-1922011 Phaseolus vulgaris
Phvul.003G020000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1917195-1919194 Phaseolus vulgaris
Phvul.003G020000 5.0kb upstream 5.0kb upstream 7817 true Chr03: 1919195-1927011 Phaseolus vulgaris
Phvul.003G020000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1922012-1927011 Phaseolus vulgaris
Phvul.003G020000 5.0kb downstream 5.0kb downstream 7817 true Chr03: 1914195-1922011 Phaseolus vulgaris
Phvul.003G020000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1914195-1919194 Phaseolus vulgaris
Phvul.003G020000 10.0kb upstream 10.0kb upstream 12817 true Chr03: 1919195-1932011 Phaseolus vulgaris
Phvul.003G020000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1922012-1932011 Phaseolus vulgaris
Phvul.003G020000 10.0kb downstream 10.0kb downstream 12817 true Chr03: 1909195-1922011 Phaseolus vulgaris
Phvul.003G020000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1909195-1919194 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301513 5265 Fabidae View MSA
124071640 5270 Rosid View MSA
123753505 5271 Pentapetalae View MSA
122796711 5272 Eudicot View MSA
122051611 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121351374 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.4288 0.0 80.4668   High
cufflinks 2.35703 0.0 10.8343    
cufflinks 0.66324 0.0 2.91495    
cufflinks 18.5961 0.0 70.5806   High
cufflinks 0.990644 0.0 5.6297    
cufflinks 1.55285 0.0 5.58261    
cufflinks 0.154845 0.0 0.623907 Low Low
cufflinks 0.498218 0.0 2.28628    
cufflinks 0.257682 0.0 0.999284 Low Low
cufflinks 2.76725 0.0 14.1331    
cufflinks 1.40602 0.0 8.8153    

0 Strain