Gene : Phvul.003G024500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR20922:SF17 - F24J5.3 Genomic Order:  253
Name:  ? Phvul.003G024500 Secondary Identifier:  ? PAC:37146728
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G024500 0.5kb upstream 0.5kb upstream 4071 true Chr03: 2318463-2322533 Phaseolus vulgaris
Phvul.003G024500 0.5kb upstream 0.5kb upstream 500 false Chr03: 2322034-2322533 Phaseolus vulgaris
Phvul.003G024500 0.5kb downstream 0.5kb downstream 4071 true Chr03: 2317963-2322033 Phaseolus vulgaris
Phvul.003G024500 0.5kb downstream 0.5kb downstream 500 false Chr03: 2317963-2318462 Phaseolus vulgaris
Phvul.003G024500 1.0kb upstream 1.0kb upstream 4571 true Chr03: 2318463-2323033 Phaseolus vulgaris
Phvul.003G024500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 2322034-2323033 Phaseolus vulgaris
Phvul.003G024500 1.0kb downstream 1.0kb downstream 4571 true Chr03: 2317463-2322033 Phaseolus vulgaris
Phvul.003G024500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 2317463-2318462 Phaseolus vulgaris
Phvul.003G024500 2.0kb upstream 2.0kb upstream 5571 true Chr03: 2318463-2324033 Phaseolus vulgaris
Phvul.003G024500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 2322034-2324033 Phaseolus vulgaris
Phvul.003G024500 2.0kb downstream 2.0kb downstream 5571 true Chr03: 2316463-2322033 Phaseolus vulgaris
Phvul.003G024500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 2316463-2318462 Phaseolus vulgaris
Phvul.003G024500 5.0kb upstream 5.0kb upstream 8571 true Chr03: 2318463-2327033 Phaseolus vulgaris
Phvul.003G024500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 2322034-2327033 Phaseolus vulgaris
Phvul.003G024500 5.0kb downstream 5.0kb downstream 8571 true Chr03: 2313463-2322033 Phaseolus vulgaris
Phvul.003G024500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 2313463-2318462 Phaseolus vulgaris
Phvul.003G024500 10.0kb upstream 10.0kb upstream 13571 true Chr03: 2318463-2332033 Phaseolus vulgaris
Phvul.003G024500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 2322034-2332033 Phaseolus vulgaris
Phvul.003G024500 10.0kb downstream 10.0kb downstream 13571 true Chr03: 2308463-2322033 Phaseolus vulgaris
Phvul.003G024500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 2308463-2318462 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309268 5265 Fabidae View MSA
124068181 5270 Rosid View MSA
123747456 5271 Pentapetalae View MSA
122796355 5272 Eudicot View MSA
122048491 5273 Angiosperm View MSA
121349693 5274 Embryophyte View MSA
123425918 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.1143 0.0 52.9235   High
cufflinks 16.287 0.0 45.9863    
cufflinks 23.2038 0.0 63.433   High
cufflinks 18.3174 0.0 51.1695    
cufflinks 11.0487 0.0 32.6899    
cufflinks 12.0515 0.0 35.0926    
cufflinks 5.28381 0.0 16.9155   Low
cufflinks 8.04793 0.0 24.5266    
cufflinks 4.17407 0.0 13.7236   Low
cufflinks 9.43437 0.0 28.3253    
cufflinks 10.5032 0.0 31.1727    

0 Strain