Gene : Phvul.003G024700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR19241:SF303 - ABC TRANSPORTER G FAMILY MEMBER 21 Genomic Order:  255
Name:  ? Phvul.003G024700 Secondary Identifier:  ? PAC:37147369
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G024700 0.5kb upstream 0.5kb upstream 5300 true Chr03: 2369223-2374522 Phaseolus vulgaris
Phvul.003G024700 0.5kb upstream 0.5kb upstream 500 false Chr03: 2374023-2374522 Phaseolus vulgaris
Phvul.003G024700 0.5kb downstream 0.5kb downstream 5300 true Chr03: 2368723-2374022 Phaseolus vulgaris
Phvul.003G024700 0.5kb downstream 0.5kb downstream 500 false Chr03: 2368723-2369222 Phaseolus vulgaris
Phvul.003G024700 1.0kb upstream 1.0kb upstream 5800 true Chr03: 2369223-2375022 Phaseolus vulgaris
Phvul.003G024700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 2374023-2375022 Phaseolus vulgaris
Phvul.003G024700 1.0kb downstream 1.0kb downstream 5800 true Chr03: 2368223-2374022 Phaseolus vulgaris
Phvul.003G024700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 2368223-2369222 Phaseolus vulgaris
Phvul.003G024700 2.0kb upstream 2.0kb upstream 6800 true Chr03: 2369223-2376022 Phaseolus vulgaris
Phvul.003G024700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 2374023-2376022 Phaseolus vulgaris
Phvul.003G024700 2.0kb downstream 2.0kb downstream 6800 true Chr03: 2367223-2374022 Phaseolus vulgaris
Phvul.003G024700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 2367223-2369222 Phaseolus vulgaris
Phvul.003G024700 5.0kb upstream 5.0kb upstream 9800 true Chr03: 2369223-2379022 Phaseolus vulgaris
Phvul.003G024700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 2374023-2379022 Phaseolus vulgaris
Phvul.003G024700 5.0kb downstream 5.0kb downstream 9800 true Chr03: 2364223-2374022 Phaseolus vulgaris
Phvul.003G024700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 2364223-2369222 Phaseolus vulgaris
Phvul.003G024700 10.0kb upstream 10.0kb upstream 14800 true Chr03: 2369223-2384022 Phaseolus vulgaris
Phvul.003G024700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 2374023-2384022 Phaseolus vulgaris
Phvul.003G024700 10.0kb downstream 10.0kb downstream 14800 true Chr03: 2359223-2374022 Phaseolus vulgaris
Phvul.003G024700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 2359223-2369222 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310384 5265 Fabidae View MSA
124060432 5270 Rosid View MSA
123738383 5271 Pentapetalae View MSA
122790772 5272 Eudicot View MSA
122050234 5273 Angiosperm View MSA
123428903 5275 Viridiplantae View MSA
121348566 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.275 0.0 43.9417   High
cufflinks 3.3898 0.0 14.761    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.60497 0.0 8.23102    
cufflinks 5.62998 0.0 18.1084    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.34932 0.0 6.19776    
cufflinks 0.26157 0.0 1.24887 Low Low
cufflinks 0.112562 0.0 0.462021 Low Low
cufflinks 1.66665 0.0 7.60506    
cufflinks 7.49039 0.0 26.8691    

0 Strain