Gene : Phvul.003G011600 P. vulgaris v2.1
Defline:  (1 of 2) 2.3.1.16 - Acetyl-CoA C-acyltransferase / Beta-ketothiolase Genomic Order:  124
Name:  ? Phvul.003G011600 Secondary Identifier:  ? PAC:37145552
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5136 Phaseolus vulgaris pathologic  
Pvulgaris PWY-561 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6435 Phaseolus vulgaris pathologic  
Pvulgaris PWY-735 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7606 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G011600 0.5kb upstream 0.5kb upstream 5883 true Chr03: 1201749-1207631 Phaseolus vulgaris
Phvul.003G011600 0.5kb upstream 0.5kb upstream 500 false Chr03: 1201749-1202248 Phaseolus vulgaris
Phvul.003G011600 0.5kb downstream 0.5kb downstream 5883 true Chr03: 1202249-1208131 Phaseolus vulgaris
Phvul.003G011600 0.5kb downstream 0.5kb downstream 500 false Chr03: 1207632-1208131 Phaseolus vulgaris
Phvul.003G011600 1.0kb upstream 1.0kb upstream 6383 true Chr03: 1201249-1207631 Phaseolus vulgaris
Phvul.003G011600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1201249-1202248 Phaseolus vulgaris
Phvul.003G011600 1.0kb downstream 1.0kb downstream 6383 true Chr03: 1202249-1208631 Phaseolus vulgaris
Phvul.003G011600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1207632-1208631 Phaseolus vulgaris
Phvul.003G011600 2.0kb upstream 2.0kb upstream 7383 true Chr03: 1200249-1207631 Phaseolus vulgaris
Phvul.003G011600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1200249-1202248 Phaseolus vulgaris
Phvul.003G011600 2.0kb downstream 2.0kb downstream 7383 true Chr03: 1202249-1209631 Phaseolus vulgaris
Phvul.003G011600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1207632-1209631 Phaseolus vulgaris
Phvul.003G011600 5.0kb upstream 5.0kb upstream 10383 true Chr03: 1197249-1207631 Phaseolus vulgaris
Phvul.003G011600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1197249-1202248 Phaseolus vulgaris
Phvul.003G011600 5.0kb downstream 5.0kb downstream 10383 true Chr03: 1202249-1212631 Phaseolus vulgaris
Phvul.003G011600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1207632-1212631 Phaseolus vulgaris
Phvul.003G011600 10.0kb upstream 10.0kb upstream 15383 true Chr03: 1192249-1207631 Phaseolus vulgaris
Phvul.003G011600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1192249-1202248 Phaseolus vulgaris
Phvul.003G011600 10.0kb downstream 10.0kb downstream 15383 true Chr03: 1202249-1217631 Phaseolus vulgaris
Phvul.003G011600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1207632-1217631 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296304 5265 Fabidae View MSA
124070477 5270 Rosid View MSA
123750766 5271 Pentapetalae View MSA
122786071 5272 Eudicot View MSA
122045703 5273 Angiosperm View MSA
121347485 5274 Embryophyte View MSA
123424542 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.1252 0.0 29.4928    
cufflinks 14.4171 0.0 37.6663    
cufflinks 6.21793 0.0 17.2901   Low
cufflinks 56.7535 0.0 151.612 High High
cufflinks 18.6735 0.0 48.4047    
cufflinks 14.5769 0.0 38.0643    
cufflinks 17.2005 0.0 44.6203    
cufflinks 13.2752 0.0 34.7558    
cufflinks 14.1267 0.0 36.9173    
cufflinks 11.6891 0.0 30.9298    
cufflinks 25.3165 0.0 65.4476    

0 Strain