Gene : Phvul.003G013600 P. vulgaris v2.1
Defline:  (1 of 5) PTHR24078:SF279 - DUPLICATED SANT DNA-BINDING DOMAIN-CONTAINING PROTEIN Genomic Order:  144
Name:  ? Phvul.003G013600 Secondary Identifier:  ? PAC:37147122
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G013600 0.5kb upstream 0.5kb upstream 10549 true Chr03: 1381862-1392410 Phaseolus vulgaris
Phvul.003G013600 0.5kb upstream 0.5kb upstream 500 false Chr03: 1391911-1392410 Phaseolus vulgaris
Phvul.003G013600 0.5kb downstream 0.5kb downstream 10549 true Chr03: 1381362-1391910 Phaseolus vulgaris
Phvul.003G013600 0.5kb downstream 0.5kb downstream 500 false Chr03: 1381362-1381861 Phaseolus vulgaris
Phvul.003G013600 1.0kb upstream 1.0kb upstream 11049 true Chr03: 1381862-1392910 Phaseolus vulgaris
Phvul.003G013600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1391911-1392910 Phaseolus vulgaris
Phvul.003G013600 1.0kb downstream 1.0kb downstream 11049 true Chr03: 1380862-1391910 Phaseolus vulgaris
Phvul.003G013600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1380862-1381861 Phaseolus vulgaris
Phvul.003G013600 2.0kb upstream 2.0kb upstream 12049 true Chr03: 1381862-1393910 Phaseolus vulgaris
Phvul.003G013600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1391911-1393910 Phaseolus vulgaris
Phvul.003G013600 2.0kb downstream 2.0kb downstream 12049 true Chr03: 1379862-1391910 Phaseolus vulgaris
Phvul.003G013600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1379862-1381861 Phaseolus vulgaris
Phvul.003G013600 5.0kb upstream 5.0kb upstream 15049 true Chr03: 1381862-1396910 Phaseolus vulgaris
Phvul.003G013600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1391911-1396910 Phaseolus vulgaris
Phvul.003G013600 5.0kb downstream 5.0kb downstream 15049 true Chr03: 1376862-1391910 Phaseolus vulgaris
Phvul.003G013600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1376862-1381861 Phaseolus vulgaris
Phvul.003G013600 10.0kb upstream 10.0kb upstream 20049 true Chr03: 1381862-1401910 Phaseolus vulgaris
Phvul.003G013600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1391911-1401910 Phaseolus vulgaris
Phvul.003G013600 10.0kb downstream 10.0kb downstream 20049 true Chr03: 1371862-1391910 Phaseolus vulgaris
Phvul.003G013600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1371862-1381861 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311252 5265 Fabidae View MSA
124061901 5270 Rosid View MSA
123750752 5271 Pentapetalae View MSA
122788591 5272 Eudicot View MSA
122045009 5273 Angiosperm View MSA
121349410 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.3251 0.0 27.0224    
cufflinks 9.01614 0.0 31.8983    
cufflinks 13.4453 0.0 39.0721   High
cufflinks 8.54581 0.0 30.8935    
cufflinks 7.32814 0.0 27.2165    
cufflinks 12.9479 0.0 43.1878   High
cufflinks 5.16715 0.0 20.2172   Low
cufflinks 5.63393 0.0 21.3868   Low
cufflinks 5.38513 0.0 20.885   Low
cufflinks 9.85691 0.0 38.8715    
cufflinks 8.80427 0.0 34.6961    

0 Strain