Gene : Phvul.003G013800 P. vulgaris v2.1
Defline:  (1 of 5) PTHR31614:SF2 - F28N24.16 PROTEIN Genomic Order:  146
Name:  ? Phvul.003G013800 Secondary Identifier:  ? PAC:37145256
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G013800 0.5kb upstream 0.5kb upstream 1458 true Chr03: 1409494-1410951 Phaseolus vulgaris
Phvul.003G013800 0.5kb upstream 0.5kb upstream 500 false Chr03: 1410452-1410951 Phaseolus vulgaris
Phvul.003G013800 0.5kb downstream 0.5kb downstream 1458 true Chr03: 1408994-1410451 Phaseolus vulgaris
Phvul.003G013800 0.5kb downstream 0.5kb downstream 500 false Chr03: 1408994-1409493 Phaseolus vulgaris
Phvul.003G013800 1.0kb upstream 1.0kb upstream 1958 true Chr03: 1409494-1411451 Phaseolus vulgaris
Phvul.003G013800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1410452-1411451 Phaseolus vulgaris
Phvul.003G013800 1.0kb downstream 1.0kb downstream 1958 true Chr03: 1408494-1410451 Phaseolus vulgaris
Phvul.003G013800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1408494-1409493 Phaseolus vulgaris
Phvul.003G013800 2.0kb upstream 2.0kb upstream 2958 true Chr03: 1409494-1412451 Phaseolus vulgaris
Phvul.003G013800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1410452-1412451 Phaseolus vulgaris
Phvul.003G013800 2.0kb downstream 2.0kb downstream 2958 true Chr03: 1407494-1410451 Phaseolus vulgaris
Phvul.003G013800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1407494-1409493 Phaseolus vulgaris
Phvul.003G013800 5.0kb upstream 5.0kb upstream 5958 true Chr03: 1409494-1415451 Phaseolus vulgaris
Phvul.003G013800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1410452-1415451 Phaseolus vulgaris
Phvul.003G013800 5.0kb downstream 5.0kb downstream 5958 true Chr03: 1404494-1410451 Phaseolus vulgaris
Phvul.003G013800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1404494-1409493 Phaseolus vulgaris
Phvul.003G013800 10.0kb upstream 10.0kb upstream 10958 true Chr03: 1409494-1420451 Phaseolus vulgaris
Phvul.003G013800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1410452-1420451 Phaseolus vulgaris
Phvul.003G013800 10.0kb downstream 10.0kb downstream 10958 true Chr03: 1399494-1410451 Phaseolus vulgaris
Phvul.003G013800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1399494-1409493 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314250 5265 Fabidae View MSA
124069142 5270 Rosid View MSA
123747822 5271 Pentapetalae View MSA
122796154 5272 Eudicot View MSA
122045197 5273 Angiosperm View MSA
121310413 5274 Embryophyte View MSA
123347903 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 71.5306 0.0 185.214 High  
cufflinks 0.0588964 0.0 0.294166 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 51.9906 0.0 136.121 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0686929 0.0 0.33907 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain