Gene : Phvul.003G015900 P. vulgaris v2.1
Defline:  (1 of 1) PF00069//PF00954 - Protein kinase domain (Pkinase) // S-locus glycoprotein domain (S_locus_glycop) Genomic Order:  167
Name:  ? Phvul.003G015900 Secondary Identifier:  ? PAC:37145490
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G015900 0.5kb upstream 0.5kb upstream 3283 true Chr03: 1577172-1580454 Phaseolus vulgaris
Phvul.003G015900 0.5kb upstream 0.5kb upstream 500 false Chr03: 1577172-1577671 Phaseolus vulgaris
Phvul.003G015900 0.5kb downstream 0.5kb downstream 3283 true Chr03: 1577672-1580954 Phaseolus vulgaris
Phvul.003G015900 0.5kb downstream 0.5kb downstream 500 false Chr03: 1580455-1580954 Phaseolus vulgaris
Phvul.003G015900 1.0kb upstream 1.0kb upstream 3783 true Chr03: 1576672-1580454 Phaseolus vulgaris
Phvul.003G015900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1576672-1577671 Phaseolus vulgaris
Phvul.003G015900 1.0kb downstream 1.0kb downstream 3783 true Chr03: 1577672-1581454 Phaseolus vulgaris
Phvul.003G015900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1580455-1581454 Phaseolus vulgaris
Phvul.003G015900 2.0kb upstream 2.0kb upstream 4783 true Chr03: 1575672-1580454 Phaseolus vulgaris
Phvul.003G015900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1575672-1577671 Phaseolus vulgaris
Phvul.003G015900 2.0kb downstream 2.0kb downstream 4783 true Chr03: 1577672-1582454 Phaseolus vulgaris
Phvul.003G015900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1580455-1582454 Phaseolus vulgaris
Phvul.003G015900 5.0kb upstream 5.0kb upstream 7783 true Chr03: 1572672-1580454 Phaseolus vulgaris
Phvul.003G015900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1572672-1577671 Phaseolus vulgaris
Phvul.003G015900 5.0kb downstream 5.0kb downstream 7783 true Chr03: 1577672-1585454 Phaseolus vulgaris
Phvul.003G015900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1580455-1585454 Phaseolus vulgaris
Phvul.003G015900 10.0kb upstream 10.0kb upstream 12783 true Chr03: 1567672-1580454 Phaseolus vulgaris
Phvul.003G015900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1567672-1577671 Phaseolus vulgaris
Phvul.003G015900 10.0kb downstream 10.0kb downstream 12783 true Chr03: 1577672-1590454 Phaseolus vulgaris
Phvul.003G015900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1580455-1590454 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303302 5265 Fabidae View MSA
124070740 5270 Rosid View MSA
123745678 5271 Pentapetalae View MSA
122771601 5272 Eudicot View MSA
122048307 5273 Angiosperm View MSA
121310924 5274 Embryophyte View MSA
123348296 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.1144 0.0 36.4831   High
cufflinks 7.11623 0.0 18.7771   Low
cufflinks 9.65578 0.0 25.0763    
cufflinks 6.1798 0.0 16.5338   Low
cufflinks 8.55814 0.0 22.3815    
cufflinks 12.0544 0.0 31.1809    
cufflinks 13.1629 0.0 34.0241    
cufflinks 16.4008 0.0 42.4655   High
cufflinks 13.8449 0.0 35.788    
cufflinks 7.04274 0.0 18.6188   Low
cufflinks 7.78499 0.0 20.4569    

0 Strain