Gene : Phvul.003G014400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31062:SF44 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 27-RELATED Genomic Order:  152
Name:  ? Phvul.003G014400 Secondary Identifier:  ? PAC:37146119
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G014400 0.5kb upstream 0.5kb upstream 3355 true Chr03: 1446181-1449535 Phaseolus vulgaris
Phvul.003G014400 0.5kb upstream 0.5kb upstream 500 false Chr03: 1449036-1449535 Phaseolus vulgaris
Phvul.003G014400 0.5kb downstream 0.5kb downstream 3355 true Chr03: 1445681-1449035 Phaseolus vulgaris
Phvul.003G014400 0.5kb downstream 0.5kb downstream 500 false Chr03: 1445681-1446180 Phaseolus vulgaris
Phvul.003G014400 1.0kb upstream 1.0kb upstream 3855 true Chr03: 1446181-1450035 Phaseolus vulgaris
Phvul.003G014400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1449036-1450035 Phaseolus vulgaris
Phvul.003G014400 1.0kb downstream 1.0kb downstream 3855 true Chr03: 1445181-1449035 Phaseolus vulgaris
Phvul.003G014400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1445181-1446180 Phaseolus vulgaris
Phvul.003G014400 2.0kb upstream 2.0kb upstream 4855 true Chr03: 1446181-1451035 Phaseolus vulgaris
Phvul.003G014400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1449036-1451035 Phaseolus vulgaris
Phvul.003G014400 2.0kb downstream 2.0kb downstream 4855 true Chr03: 1444181-1449035 Phaseolus vulgaris
Phvul.003G014400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1444181-1446180 Phaseolus vulgaris
Phvul.003G014400 5.0kb upstream 5.0kb upstream 7855 true Chr03: 1446181-1454035 Phaseolus vulgaris
Phvul.003G014400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1449036-1454035 Phaseolus vulgaris
Phvul.003G014400 5.0kb downstream 5.0kb downstream 7855 true Chr03: 1441181-1449035 Phaseolus vulgaris
Phvul.003G014400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1441181-1446180 Phaseolus vulgaris
Phvul.003G014400 10.0kb upstream 10.0kb upstream 12855 true Chr03: 1446181-1459035 Phaseolus vulgaris
Phvul.003G014400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1449036-1459035 Phaseolus vulgaris
Phvul.003G014400 10.0kb downstream 10.0kb downstream 12855 true Chr03: 1436181-1449035 Phaseolus vulgaris
Phvul.003G014400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1436181-1446180 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309584 5265 Fabidae View MSA
124065411 5270 Rosid View MSA
123745247 5271 Pentapetalae View MSA
122794660 5272 Eudicot View MSA
122049542 5273 Angiosperm View MSA
121347970 5274 Embryophyte View MSA
123380694 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.29676 0.0 18.3275   Low
cufflinks 14.7688 0.0 39.7275    
cufflinks 46.0693 0.0 119.431 High High
cufflinks 16.5017 0.0 44.1392    
cufflinks 55.6497 0.0 144.601 High High
cufflinks 28.4399 0.0 73.7468    
cufflinks 25.8886 0.0 67.3316    
cufflinks 18.2576 0.0 48.2369    
cufflinks 25.6134 0.0 66.7025    
cufflinks 15.1616 0.0 40.792    
cufflinks 47.7046 0.0 123.502 High High

0 Strain