Gene : Phvul.003G015000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11649:SF57 - GTP-BINDING PROTEIN ERG Genomic Order:  158
Name:  ? Phvul.003G015000 Secondary Identifier:  ? PAC:37148385
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G015000 0.5kb upstream 0.5kb upstream 7620 true Chr03: 1513039-1520658 Phaseolus vulgaris
Phvul.003G015000 0.5kb upstream 0.5kb upstream 500 false Chr03: 1520159-1520658 Phaseolus vulgaris
Phvul.003G015000 0.5kb downstream 0.5kb downstream 7620 true Chr03: 1512539-1520158 Phaseolus vulgaris
Phvul.003G015000 0.5kb downstream 0.5kb downstream 500 false Chr03: 1512539-1513038 Phaseolus vulgaris
Phvul.003G015000 1.0kb upstream 1.0kb upstream 8120 true Chr03: 1513039-1521158 Phaseolus vulgaris
Phvul.003G015000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1520159-1521158 Phaseolus vulgaris
Phvul.003G015000 1.0kb downstream 1.0kb downstream 8120 true Chr03: 1512039-1520158 Phaseolus vulgaris
Phvul.003G015000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1512039-1513038 Phaseolus vulgaris
Phvul.003G015000 2.0kb upstream 2.0kb upstream 9120 true Chr03: 1513039-1522158 Phaseolus vulgaris
Phvul.003G015000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1520159-1522158 Phaseolus vulgaris
Phvul.003G015000 2.0kb downstream 2.0kb downstream 9120 true Chr03: 1511039-1520158 Phaseolus vulgaris
Phvul.003G015000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1511039-1513038 Phaseolus vulgaris
Phvul.003G015000 5.0kb upstream 5.0kb upstream 12120 true Chr03: 1513039-1525158 Phaseolus vulgaris
Phvul.003G015000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1520159-1525158 Phaseolus vulgaris
Phvul.003G015000 5.0kb downstream 5.0kb downstream 12120 true Chr03: 1508039-1520158 Phaseolus vulgaris
Phvul.003G015000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1508039-1513038 Phaseolus vulgaris
Phvul.003G015000 10.0kb upstream 10.0kb upstream 17120 true Chr03: 1513039-1530158 Phaseolus vulgaris
Phvul.003G015000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1520159-1530158 Phaseolus vulgaris
Phvul.003G015000 10.0kb downstream 10.0kb downstream 17120 true Chr03: 1503039-1520158 Phaseolus vulgaris
Phvul.003G015000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1503039-1513038 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303956 5265 Fabidae View MSA
124060495 5270 Rosid View MSA
123746467 5271 Pentapetalae View MSA
122790758 5272 Eudicot View MSA
122042684 5273 Angiosperm View MSA
121343994 5274 Embryophyte View MSA
123428542 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.3008 0.0 17.9441   Low
cufflinks 7.02844 0.0 26.0874    
cufflinks 3.7509 0.0 13.9159   Low
cufflinks 6.65199 0.0 21.4677    
cufflinks 6.19343 0.0 23.7047    
cufflinks 3.80806 0.0 16.379   Low
cufflinks 6.30193 0.0 23.7673    
cufflinks 5.78789 0.0 22.3882    
cufflinks 6.96669 0.0 25.7353    
cufflinks 7.12246 0.0 26.4535    
cufflinks 6.01252 0.0 23.2126    

0 Strain