Gene : Phvul.003G004300 P. vulgaris v2.1
Defline:  (1 of 3) KOG0716 - Molecular chaperone (DnaJ superfamily) Genomic Order:  20
Name:  ? Phvul.003G004300 Secondary Identifier:  ? PAC:37146947
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G004300 0.5kb upstream 0.5kb upstream 4086 true Chr03: 183172-187257 Phaseolus vulgaris
Phvul.003G004300 0.5kb upstream 0.5kb upstream 500 false Chr03: 183172-183671 Phaseolus vulgaris
Phvul.003G004300 0.5kb downstream 0.5kb downstream 4086 true Chr03: 183672-187757 Phaseolus vulgaris
Phvul.003G004300 0.5kb downstream 0.5kb downstream 500 false Chr03: 187258-187757 Phaseolus vulgaris
Phvul.003G004300 1.0kb upstream 1.0kb upstream 4586 true Chr03: 182672-187257 Phaseolus vulgaris
Phvul.003G004300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 182672-183671 Phaseolus vulgaris
Phvul.003G004300 1.0kb downstream 1.0kb downstream 4586 true Chr03: 183672-188257 Phaseolus vulgaris
Phvul.003G004300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 187258-188257 Phaseolus vulgaris
Phvul.003G004300 2.0kb upstream 2.0kb upstream 5586 true Chr03: 181672-187257 Phaseolus vulgaris
Phvul.003G004300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 181672-183671 Phaseolus vulgaris
Phvul.003G004300 2.0kb downstream 2.0kb downstream 5586 true Chr03: 183672-189257 Phaseolus vulgaris
Phvul.003G004300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 187258-189257 Phaseolus vulgaris
Phvul.003G004300 5.0kb upstream 5.0kb upstream 8586 true Chr03: 178672-187257 Phaseolus vulgaris
Phvul.003G004300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 178672-183671 Phaseolus vulgaris
Phvul.003G004300 5.0kb downstream 5.0kb downstream 8586 true Chr03: 183672-192257 Phaseolus vulgaris
Phvul.003G004300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 187258-192257 Phaseolus vulgaris
Phvul.003G004300 10.0kb upstream 10.0kb upstream 13586 true Chr03: 173672-187257 Phaseolus vulgaris
Phvul.003G004300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 173672-183671 Phaseolus vulgaris
Phvul.003G004300 10.0kb downstream 10.0kb downstream 13586 true Chr03: 183672-197257 Phaseolus vulgaris
Phvul.003G004300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 187258-197257 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301650 5265 Fabidae View MSA
124060750 5270 Rosid View MSA
123753509 5271 Pentapetalae View MSA
122795758 5272 Eudicot View MSA
122045592 5273 Angiosperm View MSA
121348756 5274 Embryophyte View MSA
123428421 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 124.279 0.0 352.704 High High
cufflinks 2.13115 0.0 6.79762    
cufflinks 51.7812 0.0 136.355 High High
cufflinks 9.86854 0.0 26.8914    
cufflinks 3.47396 0.0 10.5709    
cufflinks 10.6081 0.0 28.6415    
cufflinks 0.247114 0.0 0.968503 Low  
cufflinks 0.0488673 0.0 0.220094 Low Low
cufflinks 0.0722307 0.0 0.313693 Low Low
cufflinks 15.1561 0.0 39.9796    
cufflinks 3.64663 0.0 11.0028    

0 Strain