Gene : Phvul.003G004000 P. vulgaris v2.1
Defline:  (1 of 2) K13101 - G patch domain and KOW motifs-containing protein (GPKOW) Genomic Order:  23
Name:  ? Phvul.003G004000 Secondary Identifier:  ? PAC:37145275
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G004000 0.5kb upstream 0.5kb upstream 4149 true Chr03: 218533-222681 Phaseolus vulgaris
Phvul.003G004000 0.5kb upstream 0.5kb upstream 500 false Chr03: 222182-222681 Phaseolus vulgaris
Phvul.003G004000 0.5kb downstream 0.5kb downstream 4149 true Chr03: 218033-222181 Phaseolus vulgaris
Phvul.003G004000 0.5kb downstream 0.5kb downstream 500 false Chr03: 218033-218532 Phaseolus vulgaris
Phvul.003G004000 1.0kb upstream 1.0kb upstream 4649 true Chr03: 218533-223181 Phaseolus vulgaris
Phvul.003G004000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 222182-223181 Phaseolus vulgaris
Phvul.003G004000 1.0kb downstream 1.0kb downstream 4649 true Chr03: 217533-222181 Phaseolus vulgaris
Phvul.003G004000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 217533-218532 Phaseolus vulgaris
Phvul.003G004000 2.0kb upstream 2.0kb upstream 5649 true Chr03: 218533-224181 Phaseolus vulgaris
Phvul.003G004000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 222182-224181 Phaseolus vulgaris
Phvul.003G004000 2.0kb downstream 2.0kb downstream 5649 true Chr03: 216533-222181 Phaseolus vulgaris
Phvul.003G004000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 216533-218532 Phaseolus vulgaris
Phvul.003G004000 5.0kb upstream 5.0kb upstream 8649 true Chr03: 218533-227181 Phaseolus vulgaris
Phvul.003G004000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 222182-227181 Phaseolus vulgaris
Phvul.003G004000 5.0kb downstream 5.0kb downstream 8649 true Chr03: 213533-222181 Phaseolus vulgaris
Phvul.003G004000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 213533-218532 Phaseolus vulgaris
Phvul.003G004000 10.0kb upstream 10.0kb upstream 13649 true Chr03: 218533-232181 Phaseolus vulgaris
Phvul.003G004000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 222182-232181 Phaseolus vulgaris
Phvul.003G004000 10.0kb downstream 10.0kb downstream 13649 true Chr03: 208533-222181 Phaseolus vulgaris
Phvul.003G004000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 208533-218532 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303537 5265 Fabidae View MSA
124064997 5270 Rosid View MSA
123746518 5271 Pentapetalae View MSA
122790026 5272 Eudicot View MSA
122046312 5273 Angiosperm View MSA
121346621 5274 Embryophyte View MSA
123426074 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.0784 0.0 39.054   Low
cufflinks 17.6669 0.0 45.9283    
cufflinks 16.6139 0.0 43.0811    
cufflinks 16.6062 0.0 42.9958    
cufflinks 19.2719 0.0 50.21    
cufflinks 16.3321 0.0 42.3707    
cufflinks 19.4603 0.0 50.9703    
cufflinks 18.7003 0.0 48.7845    
cufflinks 21.9261 0.0 57.6906   High
cufflinks 20.1932 0.0 52.7061   High
cufflinks 17.1469 0.0 44.5581    

0 Strain