Gene : Phvul.003G006600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22883:SF35 - PALMITOYLTRANSFERASE ZDHHC6 Genomic Order:  74
Name:  ? Phvul.003G006600 Secondary Identifier:  ? PAC:37145993
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G006600 0.5kb upstream 0.5kb upstream 5221 true Chr03: 769967-775187 Phaseolus vulgaris
Phvul.003G006600 0.5kb upstream 0.5kb upstream 500 false Chr03: 769967-770466 Phaseolus vulgaris
Phvul.003G006600 0.5kb downstream 0.5kb downstream 5221 true Chr03: 770467-775687 Phaseolus vulgaris
Phvul.003G006600 0.5kb downstream 0.5kb downstream 500 false Chr03: 775188-775687 Phaseolus vulgaris
Phvul.003G006600 1.0kb upstream 1.0kb upstream 5721 true Chr03: 769467-775187 Phaseolus vulgaris
Phvul.003G006600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 769467-770466 Phaseolus vulgaris
Phvul.003G006600 1.0kb downstream 1.0kb downstream 5721 true Chr03: 770467-776187 Phaseolus vulgaris
Phvul.003G006600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 775188-776187 Phaseolus vulgaris
Phvul.003G006600 2.0kb upstream 2.0kb upstream 6721 true Chr03: 768467-775187 Phaseolus vulgaris
Phvul.003G006600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 768467-770466 Phaseolus vulgaris
Phvul.003G006600 2.0kb downstream 2.0kb downstream 6721 true Chr03: 770467-777187 Phaseolus vulgaris
Phvul.003G006600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 775188-777187 Phaseolus vulgaris
Phvul.003G006600 5.0kb upstream 5.0kb upstream 9721 true Chr03: 765467-775187 Phaseolus vulgaris
Phvul.003G006600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 765467-770466 Phaseolus vulgaris
Phvul.003G006600 5.0kb downstream 5.0kb downstream 9721 true Chr03: 770467-780187 Phaseolus vulgaris
Phvul.003G006600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 775188-780187 Phaseolus vulgaris
Phvul.003G006600 10.0kb upstream 10.0kb upstream 14721 true Chr03: 760467-775187 Phaseolus vulgaris
Phvul.003G006600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 760467-770466 Phaseolus vulgaris
Phvul.003G006600 10.0kb downstream 10.0kb downstream 14721 true Chr03: 770467-785187 Phaseolus vulgaris
Phvul.003G006600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 775188-785187 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315342 5265 Fabidae View MSA
124074562 5270 Rosid View MSA
123740420 5271 Pentapetalae View MSA
122789701 5272 Eudicot View MSA
122042065 5273 Angiosperm View MSA
121349968 5274 Embryophyte View MSA
123428148 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.03951 0.0 12.7611    
cufflinks 3.07505 0.0 10.0061    
cufflinks 2.36292 0.0 7.91101   Low
cufflinks 3.98533 0.0 12.6772    
cufflinks 4.1562 0.0 13.1407    
cufflinks 2.45956 0.0 8.21075   Low
cufflinks 5.34141 0.0 16.3609   High
cufflinks 4.2499 0.0 13.2962    
cufflinks 5.74351 0.0 17.516   High
cufflinks 4.59814 0.0 14.316    
cufflinks 3.28838 0.0 10.6803    

0 Strain