Gene : Phvul.002G328500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR23308:SF34 - F16B3.3 PROTEIN Genomic Order:  2311
Name:  ? Phvul.002G328500 Secondary Identifier:  ? PAC:37176990
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G328500 0.5kb upstream 0.5kb upstream 2172 true Chr02: 40598561-40600732 Phaseolus vulgaris
Phvul.002G328500 0.5kb upstream 0.5kb upstream 500 false Chr02: 40598561-40599060 Phaseolus vulgaris
Phvul.002G328500 0.5kb downstream 0.5kb downstream 2172 true Chr02: 40599061-40601232 Phaseolus vulgaris
Phvul.002G328500 0.5kb downstream 0.5kb downstream 500 false Chr02: 40600733-40601232 Phaseolus vulgaris
Phvul.002G328500 1.0kb upstream 1.0kb upstream 2672 true Chr02: 40598061-40600732 Phaseolus vulgaris
Phvul.002G328500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 40598061-40599060 Phaseolus vulgaris
Phvul.002G328500 1.0kb downstream 1.0kb downstream 2672 true Chr02: 40599061-40601732 Phaseolus vulgaris
Phvul.002G328500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 40600733-40601732 Phaseolus vulgaris
Phvul.002G328500 2.0kb upstream 2.0kb upstream 3672 true Chr02: 40597061-40600732 Phaseolus vulgaris
Phvul.002G328500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 40597061-40599060 Phaseolus vulgaris
Phvul.002G328500 2.0kb downstream 2.0kb downstream 3672 true Chr02: 40599061-40602732 Phaseolus vulgaris
Phvul.002G328500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 40600733-40602732 Phaseolus vulgaris
Phvul.002G328500 5.0kb upstream 5.0kb upstream 6672 true Chr02: 40594061-40600732 Phaseolus vulgaris
Phvul.002G328500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 40594061-40599060 Phaseolus vulgaris
Phvul.002G328500 5.0kb downstream 5.0kb downstream 6672 true Chr02: 40599061-40605732 Phaseolus vulgaris
Phvul.002G328500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 40600733-40605732 Phaseolus vulgaris
Phvul.002G328500 10.0kb upstream 10.0kb upstream 11672 true Chr02: 40589061-40600732 Phaseolus vulgaris
Phvul.002G328500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 40589061-40599060 Phaseolus vulgaris
Phvul.002G328500 10.0kb downstream 10.0kb downstream 11672 true Chr02: 40599061-40610732 Phaseolus vulgaris
Phvul.002G328500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 40600733-40610732 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303128 5265 Fabidae View MSA
124050335 5270 Rosid View MSA
123743781 5271 Pentapetalae View MSA
122792695 5272 Eudicot View MSA
122045754 5273 Angiosperm View MSA
121310497 5274 Embryophyte View MSA
123427201 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.25671 0.0 12.1852   Low
cufflinks 13.1242 0.0 34.4001   High
cufflinks 3.13237 0.0 9.36681   Low
cufflinks 7.42571 0.0 20.328    
cufflinks 7.58405 0.0 20.6674    
cufflinks 7.86757 0.0 21.3704    
cufflinks 5.49102 0.0 15.2964    
cufflinks 4.38193 0.0 12.5274    
cufflinks 5.78292 0.0 16.0636    
cufflinks 7.42391 0.0 20.2655    
cufflinks 11.3012 0.0 29.8242   High

0 Strain