Gene : Phvul.002G330600 P. vulgaris v2.1
Defline:  (1 of 1) K14026 - SEL1 protein (SEL1, SEL1L) Genomic Order:  3306
Name:  ? Phvul.002G330600 Secondary Identifier:  ? PAC:37177108
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G330600 0.5kb upstream 0.5kb upstream 5295 true Chr02: 49488856-49494150 Phaseolus vulgaris
Phvul.002G330600 0.5kb upstream 0.5kb upstream 500 false Chr02: 49493651-49494150 Phaseolus vulgaris
Phvul.002G330600 0.5kb downstream 0.5kb downstream 5295 true Chr02: 49488356-49493650 Phaseolus vulgaris
Phvul.002G330600 0.5kb downstream 0.5kb downstream 500 false Chr02: 49488356-49488855 Phaseolus vulgaris
Phvul.002G330600 1.0kb upstream 1.0kb upstream 5795 true Chr02: 49488856-49494650 Phaseolus vulgaris
Phvul.002G330600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 49493651-49494650 Phaseolus vulgaris
Phvul.002G330600 1.0kb downstream 1.0kb downstream 5795 true Chr02: 49487856-49493650 Phaseolus vulgaris
Phvul.002G330600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 49487856-49488855 Phaseolus vulgaris
Phvul.002G330600 2.0kb upstream 2.0kb upstream 6795 true Chr02: 49488856-49495650 Phaseolus vulgaris
Phvul.002G330600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 49493651-49495650 Phaseolus vulgaris
Phvul.002G330600 2.0kb downstream 2.0kb downstream 6795 true Chr02: 49486856-49493650 Phaseolus vulgaris
Phvul.002G330600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 49486856-49488855 Phaseolus vulgaris
Phvul.002G330600 5.0kb upstream 5.0kb upstream 9795 true Chr02: 49488856-49498650 Phaseolus vulgaris
Phvul.002G330600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 49493651-49498650 Phaseolus vulgaris
Phvul.002G330600 5.0kb downstream 5.0kb downstream 9795 true Chr02: 49483856-49493650 Phaseolus vulgaris
Phvul.002G330600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 49483856-49488855 Phaseolus vulgaris
Phvul.002G330600 10.0kb upstream 10.0kb upstream 14795 true Chr02: 49488856-49503650 Phaseolus vulgaris
Phvul.002G330600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 49493651-49503650 Phaseolus vulgaris
Phvul.002G330600 10.0kb downstream 10.0kb downstream 14795 true Chr02: 49478856-49493650 Phaseolus vulgaris
Phvul.002G330600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 49478856-49488855 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299541 5265 Fabidae View MSA
124065958 5270 Rosid View MSA
123743984 5271 Pentapetalae View MSA
122786956 5272 Eudicot View MSA
122044163 5273 Angiosperm View MSA
123428907 5275 Viridiplantae View MSA
121346808 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.9357 0.0 54.4932    
cufflinks 26.9861 0.0 71.1383    
cufflinks 13.8914 0.0 35.91   Low
cufflinks 22.8589 0.0 59.6488    
cufflinks 22.6685 0.0 59.1925    
cufflinks 16.1871 0.0 41.8758   Low
cufflinks 20.2581 0.0 52.7955    
cufflinks 22.4424 0.0 58.6504    
cufflinks 22.4882 0.0 58.8163    
cufflinks 41.1749 0.0 112.045 High High
cufflinks 27.4042 0.0 72.3466    

0 Strain