Gene : Phvul.002G333300 P. vulgaris v2.1
Genomic Order:  3333 Name:  ? Phvul.002G333300
Secondary Identifier:  ? PAC:37178253
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G333300 0.5kb upstream 0.5kb upstream 1537 true Chr02: 49644326-49645862 Phaseolus vulgaris
Phvul.002G333300 0.5kb upstream 0.5kb upstream 500 false Chr02: 49644326-49644825 Phaseolus vulgaris
Phvul.002G333300 0.5kb downstream 0.5kb downstream 1537 true Chr02: 49644826-49646362 Phaseolus vulgaris
Phvul.002G333300 0.5kb downstream 0.5kb downstream 500 false Chr02: 49645863-49646362 Phaseolus vulgaris
Phvul.002G333300 1.0kb upstream 1.0kb upstream 2037 true Chr02: 49643826-49645862 Phaseolus vulgaris
Phvul.002G333300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 49643826-49644825 Phaseolus vulgaris
Phvul.002G333300 1.0kb downstream 1.0kb downstream 2037 true Chr02: 49644826-49646862 Phaseolus vulgaris
Phvul.002G333300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 49645863-49646862 Phaseolus vulgaris
Phvul.002G333300 2.0kb upstream 2.0kb upstream 3037 true Chr02: 49642826-49645862 Phaseolus vulgaris
Phvul.002G333300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 49642826-49644825 Phaseolus vulgaris
Phvul.002G333300 2.0kb downstream 2.0kb downstream 3037 true Chr02: 49644826-49647862 Phaseolus vulgaris
Phvul.002G333300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 49645863-49647862 Phaseolus vulgaris
Phvul.002G333300 5.0kb upstream 5.0kb upstream 6037 true Chr02: 49639826-49645862 Phaseolus vulgaris
Phvul.002G333300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 49639826-49644825 Phaseolus vulgaris
Phvul.002G333300 5.0kb downstream 5.0kb downstream 6037 true Chr02: 49644826-49650862 Phaseolus vulgaris
Phvul.002G333300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 49645863-49650862 Phaseolus vulgaris
Phvul.002G333300 10.0kb upstream 10.0kb upstream 11037 true Chr02: 49634826-49645862 Phaseolus vulgaris
Phvul.002G333300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 49634826-49644825 Phaseolus vulgaris
Phvul.002G333300 10.0kb downstream 10.0kb downstream 11037 true Chr02: 49644826-49655862 Phaseolus vulgaris
Phvul.002G333300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 49645863-49655862 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304750 5265 Fabidae View MSA
124061519 5270 Rosid View MSA
123741482 5271 Pentapetalae View MSA
122792533 5272 Eudicot View MSA
122041645 5273 Angiosperm View MSA
121343821 5274 Embryophyte View MSA
123426521 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.8256 0.0 87.322    
cufflinks 37.6139 0.0 98.9711 High High
cufflinks 22.814 0.0 62.4741   Low
cufflinks 36.0862 0.0 94.9934 High High
cufflinks 27.2195 0.0 73.2746    
cufflinks 25.5202 0.0 69.0031    
cufflinks 29.7302 0.0 79.2541 High  
cufflinks 25.5095 0.0 69.0678    
cufflinks 29.2423 0.0 77.8771    
cufflinks 21.3667 0.0 58.7163   Low
cufflinks 31.9031 0.0 84.717    

0 Strain