Gene : Phvul.002G332600 P. vulgaris v2.1
Genomic Order:  3326 Name:  ? Phvul.002G332600
Secondary Identifier:  ? PAC:37178111
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G332600 0.5kb upstream 0.5kb upstream 5349 true Chr02: 49595822-49601170 Phaseolus vulgaris
Phvul.002G332600 0.5kb upstream 0.5kb upstream 500 false Chr02: 49600671-49601170 Phaseolus vulgaris
Phvul.002G332600 0.5kb downstream 0.5kb downstream 5349 true Chr02: 49595322-49600670 Phaseolus vulgaris
Phvul.002G332600 0.5kb downstream 0.5kb downstream 500 false Chr02: 49595322-49595821 Phaseolus vulgaris
Phvul.002G332600 1.0kb upstream 1.0kb upstream 5849 true Chr02: 49595822-49601670 Phaseolus vulgaris
Phvul.002G332600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 49600671-49601670 Phaseolus vulgaris
Phvul.002G332600 1.0kb downstream 1.0kb downstream 5849 true Chr02: 49594822-49600670 Phaseolus vulgaris
Phvul.002G332600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 49594822-49595821 Phaseolus vulgaris
Phvul.002G332600 2.0kb upstream 2.0kb upstream 6849 true Chr02: 49595822-49602670 Phaseolus vulgaris
Phvul.002G332600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 49600671-49602670 Phaseolus vulgaris
Phvul.002G332600 2.0kb downstream 2.0kb downstream 6849 true Chr02: 49593822-49600670 Phaseolus vulgaris
Phvul.002G332600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 49593822-49595821 Phaseolus vulgaris
Phvul.002G332600 5.0kb upstream 5.0kb upstream 9849 true Chr02: 49595822-49605670 Phaseolus vulgaris
Phvul.002G332600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 49600671-49605670 Phaseolus vulgaris
Phvul.002G332600 5.0kb downstream 5.0kb downstream 9849 true Chr02: 49590822-49600670 Phaseolus vulgaris
Phvul.002G332600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 49590822-49595821 Phaseolus vulgaris
Phvul.002G332600 10.0kb upstream 10.0kb upstream 14849 true Chr02: 49595822-49610670 Phaseolus vulgaris
Phvul.002G332600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 49600671-49610670 Phaseolus vulgaris
Phvul.002G332600 10.0kb downstream 10.0kb downstream 14849 true Chr02: 49585822-49600670 Phaseolus vulgaris
Phvul.002G332600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 49585822-49595821 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310649 5265 Fabidae View MSA
124064470 5270 Rosid View MSA
123737614 5271 Pentapetalae View MSA
122787250 5272 Eudicot View MSA
122047147 5273 Angiosperm View MSA
121345780 5274 Embryophyte View MSA
123424566 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.229 0.0 25.4779    
cufflinks 14.9567 0.0 39.7586    
cufflinks 31.5979 0.0 81.6776   High
cufflinks 14.1626 0.0 37.7864    
cufflinks 12.8933 0.0 34.6915    
cufflinks 16.2478 0.0 42.962    
cufflinks 6.88968 0.0 19.5567   Low
cufflinks 7.81804 0.0 21.9132   Low
cufflinks 7.74668 0.0 21.7862   Low
cufflinks 22.0277 0.0 57.3415   High
cufflinks 10.76 0.0 29.4325    

0 Strain