Gene : Phvul.002G319300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11886:SF39 - DYNEIN LIGHT CHAIN TYPE 1-LIKE PROTEIN Genomic Order:  3187
Name:  ? Phvul.002G319300 Secondary Identifier:  ? PAC:37176616
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G319300 0.5kb upstream 0.5kb upstream 2645 true Chr02: 48538896-48541540 Phaseolus vulgaris
Phvul.002G319300 0.5kb upstream 0.5kb upstream 500 false Chr02: 48538896-48539395 Phaseolus vulgaris
Phvul.002G319300 0.5kb downstream 0.5kb downstream 2645 true Chr02: 48539396-48542040 Phaseolus vulgaris
Phvul.002G319300 0.5kb downstream 0.5kb downstream 500 false Chr02: 48541541-48542040 Phaseolus vulgaris
Phvul.002G319300 1.0kb upstream 1.0kb upstream 3145 true Chr02: 48538396-48541540 Phaseolus vulgaris
Phvul.002G319300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 48538396-48539395 Phaseolus vulgaris
Phvul.002G319300 1.0kb downstream 1.0kb downstream 3145 true Chr02: 48539396-48542540 Phaseolus vulgaris
Phvul.002G319300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 48541541-48542540 Phaseolus vulgaris
Phvul.002G319300 2.0kb upstream 2.0kb upstream 4145 true Chr02: 48537396-48541540 Phaseolus vulgaris
Phvul.002G319300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 48537396-48539395 Phaseolus vulgaris
Phvul.002G319300 2.0kb downstream 2.0kb downstream 4145 true Chr02: 48539396-48543540 Phaseolus vulgaris
Phvul.002G319300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 48541541-48543540 Phaseolus vulgaris
Phvul.002G319300 5.0kb upstream 5.0kb upstream 7145 true Chr02: 48534396-48541540 Phaseolus vulgaris
Phvul.002G319300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 48534396-48539395 Phaseolus vulgaris
Phvul.002G319300 5.0kb downstream 5.0kb downstream 7145 true Chr02: 48539396-48546540 Phaseolus vulgaris
Phvul.002G319300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 48541541-48546540 Phaseolus vulgaris
Phvul.002G319300 10.0kb upstream 10.0kb upstream 12145 true Chr02: 48529396-48541540 Phaseolus vulgaris
Phvul.002G319300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 48529396-48539395 Phaseolus vulgaris
Phvul.002G319300 10.0kb downstream 10.0kb downstream 12145 true Chr02: 48539396-48551540 Phaseolus vulgaris
Phvul.002G319300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 48541541-48551540 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312504 5265 Fabidae View MSA
124072006 5270 Rosid View MSA
123749620 5271 Pentapetalae View MSA
122794376 5272 Eudicot View MSA
122048916 5273 Angiosperm View MSA
121352078 5274 Embryophyte View MSA
123382526 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.28009 0.0 24.9058    
cufflinks 1.56459 0.0 5.64053    
cufflinks 1.32696 0.0 4.84047    
cufflinks 32.5509 0.0 86.2465   High
cufflinks 7.92452 0.0 24.0549    
cufflinks 1.95845 0.0 6.90232    
cufflinks 5.83087 0.0 18.1994    
cufflinks 18.2748 0.0 50.4083   High
cufflinks 6.97237 0.0 21.3425    
cufflinks 0.274163 0.0 1.14213 Low Low
cufflinks 7.47955 0.0 22.7784    

0 Strain