Gene : Phvul.002G321700 P. vulgaris v2.1
Defline:  (1 of 3) PTHR11566:SF80 - DYNAMIN-RELATED PROTEIN 1C Genomic Order:  3211
Name:  ? Phvul.002G321700 Secondary Identifier:  ? PAC:37176936
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G321700 0.5kb upstream 0.5kb upstream 8397 true Chr02: 48694641-48703037 Phaseolus vulgaris
Phvul.002G321700 0.5kb upstream 0.5kb upstream 500 false Chr02: 48694641-48695140 Phaseolus vulgaris
Phvul.002G321700 0.5kb downstream 0.5kb downstream 8397 true Chr02: 48695141-48703537 Phaseolus vulgaris
Phvul.002G321700 0.5kb downstream 0.5kb downstream 500 false Chr02: 48703038-48703537 Phaseolus vulgaris
Phvul.002G321700 1.0kb upstream 1.0kb upstream 8897 true Chr02: 48694141-48703037 Phaseolus vulgaris
Phvul.002G321700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 48694141-48695140 Phaseolus vulgaris
Phvul.002G321700 1.0kb downstream 1.0kb downstream 8897 true Chr02: 48695141-48704037 Phaseolus vulgaris
Phvul.002G321700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 48703038-48704037 Phaseolus vulgaris
Phvul.002G321700 2.0kb upstream 2.0kb upstream 9897 true Chr02: 48693141-48703037 Phaseolus vulgaris
Phvul.002G321700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 48693141-48695140 Phaseolus vulgaris
Phvul.002G321700 2.0kb downstream 2.0kb downstream 9897 true Chr02: 48695141-48705037 Phaseolus vulgaris
Phvul.002G321700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 48703038-48705037 Phaseolus vulgaris
Phvul.002G321700 5.0kb upstream 5.0kb upstream 12897 true Chr02: 48690141-48703037 Phaseolus vulgaris
Phvul.002G321700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 48690141-48695140 Phaseolus vulgaris
Phvul.002G321700 5.0kb downstream 5.0kb downstream 12897 true Chr02: 48695141-48708037 Phaseolus vulgaris
Phvul.002G321700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 48703038-48708037 Phaseolus vulgaris
Phvul.002G321700 10.0kb upstream 10.0kb upstream 17897 true Chr02: 48685141-48703037 Phaseolus vulgaris
Phvul.002G321700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 48685141-48695140 Phaseolus vulgaris
Phvul.002G321700 10.0kb downstream 10.0kb downstream 17897 true Chr02: 48695141-48713037 Phaseolus vulgaris
Phvul.002G321700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 48703038-48713037 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303458 5265 Fabidae View MSA
124061748 5270 Rosid View MSA
123749597 5271 Pentapetalae View MSA
122793437 5272 Eudicot View MSA
122046512 5273 Angiosperm View MSA
121348434 5274 Embryophyte View MSA
123428236 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.4791 0.0 60.8642   Low
cufflinks 36.5865 0.0 96.5797 High  
cufflinks 34.5426 0.0 90.884    
cufflinks 43.0795 0.0 114.496 High  
cufflinks 34.9555 0.0 91.6385 High  
cufflinks 44.9113 0.0 120.393 High  
cufflinks 43.8886 0.0 117.689 High  
cufflinks 30.825 0.0 80.8394 High  
cufflinks 48.991 0.0 132.278 High High
cufflinks 24.5453 0.0 63.6419   Low
cufflinks 53.1798 0.0 144.134 High High

0 Strain