Gene : Phvul.002G319800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12701:SF12 - GB Genomic Order:  3192
Name:  ? Phvul.002G319800 Secondary Identifier:  ? PAC:37175312
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G319800 0.5kb upstream 0.5kb upstream 893 true Chr02: 48569942-48570834 Phaseolus vulgaris
Phvul.002G319800 0.5kb upstream 0.5kb upstream 500 false Chr02: 48570335-48570834 Phaseolus vulgaris
Phvul.002G319800 0.5kb downstream 0.5kb downstream 893 true Chr02: 48569442-48570334 Phaseolus vulgaris
Phvul.002G319800 0.5kb downstream 0.5kb downstream 500 false Chr02: 48569442-48569941 Phaseolus vulgaris
Phvul.002G319800 1.0kb upstream 1.0kb upstream 1393 true Chr02: 48569942-48571334 Phaseolus vulgaris
Phvul.002G319800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 48570335-48571334 Phaseolus vulgaris
Phvul.002G319800 1.0kb downstream 1.0kb downstream 1393 true Chr02: 48568942-48570334 Phaseolus vulgaris
Phvul.002G319800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 48568942-48569941 Phaseolus vulgaris
Phvul.002G319800 2.0kb upstream 2.0kb upstream 2393 true Chr02: 48569942-48572334 Phaseolus vulgaris
Phvul.002G319800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 48570335-48572334 Phaseolus vulgaris
Phvul.002G319800 2.0kb downstream 2.0kb downstream 2393 true Chr02: 48567942-48570334 Phaseolus vulgaris
Phvul.002G319800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 48567942-48569941 Phaseolus vulgaris
Phvul.002G319800 5.0kb upstream 5.0kb upstream 5393 true Chr02: 48569942-48575334 Phaseolus vulgaris
Phvul.002G319800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 48570335-48575334 Phaseolus vulgaris
Phvul.002G319800 5.0kb downstream 5.0kb downstream 5393 true Chr02: 48564942-48570334 Phaseolus vulgaris
Phvul.002G319800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 48564942-48569941 Phaseolus vulgaris
Phvul.002G319800 10.0kb upstream 10.0kb upstream 10393 true Chr02: 48569942-48580334 Phaseolus vulgaris
Phvul.002G319800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 48570335-48580334 Phaseolus vulgaris
Phvul.002G319800 10.0kb downstream 10.0kb downstream 10393 true Chr02: 48559942-48570334 Phaseolus vulgaris
Phvul.002G319800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 48559942-48569941 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041316 5273 Angiosperm View MSA
122304712 5265 Fabidae View MSA
124062686 5270 Rosid View MSA
123746776 5271 Pentapetalae View MSA
122788736 5272 Eudicot View MSA
121348812 5274 Embryophyte View MSA
123381026 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 109.195 0.0 288.228 High  
cufflinks 136.503 0.0 357.406 High  
cufflinks 69.1168 0.0 190.8 High Low
cufflinks 248.036 0.0 642.954 High High
cufflinks 150.726 0.0 391.364 High  
cufflinks 110.832 0.0 294.404 High  
cufflinks 94.6061 0.0 253.115 High  
cufflinks 91.6782 0.0 247.654 High  
cufflinks 135.323 0.0 353.829 High  
cufflinks 105.999 0.0 281.463 High  
cufflinks 204.691 0.0 529.12 High High

0 Strain