Gene : Phvul.002G322100 P. vulgaris v2.1
Defline:  (1 of 2) 6.3.5.7 - Glutaminyl-tRNA synthase (glutamine-hydrolyzing) / Glutamyl-tRNA(Gln) amidotransferase Genomic Order:  3215
Name:  ? Phvul.002G322100 Secondary Identifier:  ? PAC:37178751
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5921 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G322100 0.5kb upstream 0.5kb upstream 5622 true Chr02: 48723276-48728897 Phaseolus vulgaris
Phvul.002G322100 0.5kb upstream 0.5kb upstream 500 false Chr02: 48723276-48723775 Phaseolus vulgaris
Phvul.002G322100 0.5kb downstream 0.5kb downstream 5622 true Chr02: 48723776-48729397 Phaseolus vulgaris
Phvul.002G322100 0.5kb downstream 0.5kb downstream 500 false Chr02: 48728898-48729397 Phaseolus vulgaris
Phvul.002G322100 1.0kb upstream 1.0kb upstream 6122 true Chr02: 48722776-48728897 Phaseolus vulgaris
Phvul.002G322100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 48722776-48723775 Phaseolus vulgaris
Phvul.002G322100 1.0kb downstream 1.0kb downstream 6122 true Chr02: 48723776-48729897 Phaseolus vulgaris
Phvul.002G322100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 48728898-48729897 Phaseolus vulgaris
Phvul.002G322100 2.0kb upstream 2.0kb upstream 7122 true Chr02: 48721776-48728897 Phaseolus vulgaris
Phvul.002G322100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 48721776-48723775 Phaseolus vulgaris
Phvul.002G322100 2.0kb downstream 2.0kb downstream 7122 true Chr02: 48723776-48730897 Phaseolus vulgaris
Phvul.002G322100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 48728898-48730897 Phaseolus vulgaris
Phvul.002G322100 5.0kb upstream 5.0kb upstream 10122 true Chr02: 48718776-48728897 Phaseolus vulgaris
Phvul.002G322100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 48718776-48723775 Phaseolus vulgaris
Phvul.002G322100 5.0kb downstream 5.0kb downstream 10122 true Chr02: 48723776-48733897 Phaseolus vulgaris
Phvul.002G322100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 48728898-48733897 Phaseolus vulgaris
Phvul.002G322100 10.0kb upstream 10.0kb upstream 15122 true Chr02: 48713776-48728897 Phaseolus vulgaris
Phvul.002G322100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 48713776-48723775 Phaseolus vulgaris
Phvul.002G322100 10.0kb downstream 10.0kb downstream 15122 true Chr02: 48723776-48738897 Phaseolus vulgaris
Phvul.002G322100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 48728898-48738897 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304937 5265 Fabidae View MSA
124063179 5270 Rosid View MSA
123739880 5271 Pentapetalae View MSA
122793755 5272 Eudicot View MSA
122043391 5273 Angiosperm View MSA
121346505 5274 Embryophyte View MSA
123423998 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.43958 0.0 15.1402    
cufflinks 10.1068 0.0 26.7863    
cufflinks 30.9378 0.0 80.5477   High
cufflinks 5.9721 0.0 16.6521    
cufflinks 5.36597 0.0 15.1093    
cufflinks 24.0223 0.0 62.1491   High
cufflinks 2.82962 0.0 8.42306   Low
cufflinks 4.77785 0.0 13.386    
cufflinks 2.43215 0.0 7.39729   Low
cufflinks 8.26128 0.0 22.2632    
cufflinks 3.96344 0.0 11.474    

0 Strain