Gene : Phvul.002G322400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11592:SF33 - GLUTATHIONE PEROXIDASE 2-RELATED Genomic Order:  3218
Name:  ? Phvul.002G322400 Secondary Identifier:  ? PAC:37178162
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-4081 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G322400 0.5kb upstream 0.5kb upstream 3449 true Chr02: 48735636-48739084 Phaseolus vulgaris
Phvul.002G322400 0.5kb upstream 0.5kb upstream 500 false Chr02: 48738585-48739084 Phaseolus vulgaris
Phvul.002G322400 0.5kb downstream 0.5kb downstream 3449 true Chr02: 48735136-48738584 Phaseolus vulgaris
Phvul.002G322400 0.5kb downstream 0.5kb downstream 500 false Chr02: 48735136-48735635 Phaseolus vulgaris
Phvul.002G322400 1.0kb upstream 1.0kb upstream 3949 true Chr02: 48735636-48739584 Phaseolus vulgaris
Phvul.002G322400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 48738585-48739584 Phaseolus vulgaris
Phvul.002G322400 1.0kb downstream 1.0kb downstream 3949 true Chr02: 48734636-48738584 Phaseolus vulgaris
Phvul.002G322400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 48734636-48735635 Phaseolus vulgaris
Phvul.002G322400 2.0kb upstream 2.0kb upstream 4949 true Chr02: 48735636-48740584 Phaseolus vulgaris
Phvul.002G322400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 48738585-48740584 Phaseolus vulgaris
Phvul.002G322400 2.0kb downstream 2.0kb downstream 4949 true Chr02: 48733636-48738584 Phaseolus vulgaris
Phvul.002G322400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 48733636-48735635 Phaseolus vulgaris
Phvul.002G322400 5.0kb upstream 5.0kb upstream 7949 true Chr02: 48735636-48743584 Phaseolus vulgaris
Phvul.002G322400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 48738585-48743584 Phaseolus vulgaris
Phvul.002G322400 5.0kb downstream 5.0kb downstream 7949 true Chr02: 48730636-48738584 Phaseolus vulgaris
Phvul.002G322400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 48730636-48735635 Phaseolus vulgaris
Phvul.002G322400 10.0kb upstream 10.0kb upstream 12949 true Chr02: 48735636-48748584 Phaseolus vulgaris
Phvul.002G322400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 48738585-48748584 Phaseolus vulgaris
Phvul.002G322400 10.0kb downstream 10.0kb downstream 12949 true Chr02: 48725636-48738584 Phaseolus vulgaris
Phvul.002G322400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 48725636-48735635 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300994 5265 Fabidae View MSA
124060403 5270 Rosid View MSA
123752336 5271 Pentapetalae View MSA
122792727 5272 Eudicot View MSA
122049273 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 110.923 0.0 289.079 High High
cufflinks 26.3069 0.0 71.2426    
cufflinks 24.3713 0.0 66.1185    
cufflinks 88.1159 0.0 227.93 High High
cufflinks 20.5905 0.0 57.3737    
cufflinks 15.4188 0.0 43.7606   Low
cufflinks 23.5022 0.0 64.2432    
cufflinks 25.6855 0.0 69.3579    
cufflinks 37.3898 0.0 98.7277 High  
cufflinks 38.9227 0.0 102.631 High  
cufflinks 19.0638 0.0 53.4011    

0 Strain