Gene : Phvul.002G322500 P. vulgaris v2.1
Defline:  (1 of 9) PF01823 - MAC/Perforin domain (MACPF) Genomic Order:  3219
Name:  ? Phvul.002G322500 Secondary Identifier:  ? PAC:37175853
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G322500 0.5kb upstream 0.5kb upstream 6953 true Chr02: 48740322-48747274 Phaseolus vulgaris
Phvul.002G322500 0.5kb upstream 0.5kb upstream 500 false Chr02: 48746775-48747274 Phaseolus vulgaris
Phvul.002G322500 0.5kb downstream 0.5kb downstream 6953 true Chr02: 48739822-48746774 Phaseolus vulgaris
Phvul.002G322500 0.5kb downstream 0.5kb downstream 500 false Chr02: 48739822-48740321 Phaseolus vulgaris
Phvul.002G322500 1.0kb upstream 1.0kb upstream 7453 true Chr02: 48740322-48747774 Phaseolus vulgaris
Phvul.002G322500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 48746775-48747774 Phaseolus vulgaris
Phvul.002G322500 1.0kb downstream 1.0kb downstream 7453 true Chr02: 48739322-48746774 Phaseolus vulgaris
Phvul.002G322500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 48739322-48740321 Phaseolus vulgaris
Phvul.002G322500 2.0kb upstream 2.0kb upstream 8453 true Chr02: 48740322-48748774 Phaseolus vulgaris
Phvul.002G322500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 48746775-48748774 Phaseolus vulgaris
Phvul.002G322500 2.0kb downstream 2.0kb downstream 8453 true Chr02: 48738322-48746774 Phaseolus vulgaris
Phvul.002G322500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 48738322-48740321 Phaseolus vulgaris
Phvul.002G322500 5.0kb upstream 5.0kb upstream 11453 true Chr02: 48740322-48751774 Phaseolus vulgaris
Phvul.002G322500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 48746775-48751774 Phaseolus vulgaris
Phvul.002G322500 5.0kb downstream 5.0kb downstream 11453 true Chr02: 48735322-48746774 Phaseolus vulgaris
Phvul.002G322500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 48735322-48740321 Phaseolus vulgaris
Phvul.002G322500 10.0kb upstream 10.0kb upstream 16453 true Chr02: 48740322-48756774 Phaseolus vulgaris
Phvul.002G322500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 48746775-48756774 Phaseolus vulgaris
Phvul.002G322500 10.0kb downstream 10.0kb downstream 16453 true Chr02: 48730322-48746774 Phaseolus vulgaris
Phvul.002G322500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 48730322-48740321 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303456 5265 Fabidae View MSA
124070099 5270 Rosid View MSA
123749357 5271 Pentapetalae View MSA
122797493 5272 Eudicot View MSA
122048328 5273 Angiosperm View MSA
121310931 5274 Embryophyte View MSA
123348303 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.4541 0.0 40.2343   High
cufflinks 6.57521 0.0 18.1544    
cufflinks 9.77016 0.0 26.0666    
cufflinks 2.99744 0.0 8.98922    
cufflinks 6.12134 0.0 17.0777    
cufflinks 5.13985 0.0 14.505    
cufflinks 3.31426 0.0 9.7768    
cufflinks 2.70829 0.0 8.16559   Low
cufflinks 3.11959 0.0 9.27681    
cufflinks 22.871 0.0 59.1181   High
cufflinks 4.8123 0.0 13.7335    

0 Strain